prot_Ecto-sp13_S_contig9397.20994.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9397.20994.1
Unique Name	prot_Ecto-sp13_S_contig9397.20994.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	173

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9397.20994.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.180e-32
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0

Query:    1 MAAVGAIGAAVGLSDDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGLFGSSKAKVEVPDADVSVPEVS 73
            +AAVGAIGAAVGLS DKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGLFGS KAKVEVPDADVSVPEVS
Sbjct: 1099 VAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGLFGSGKAKVEVPDADVSVPEVS 1171

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BLAST of mRNA_Ecto-sp13_S_contig9397.20994.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.020e-31
Identity = 145/210 (69.05%), Postives = 156/210 (74.29%), Query Frame = 0

Query:    1 MAAVGAIGAAVGLSDDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGLFGSSKAKVEVPDADVSVPEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLG-----------------------------SAEAPSVDL-------AGKMPSVKGGVS-ELPTGDVSVTAPDVEVEGG 173
            MAAVGAIGAAVGLS DKPDAELPSGDVDASV+VPDVPSVDVKKPKKG+FGGLFGSSKAK+EVPDADV++P+V+ XXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXX                                  +APS          AGKMPSV+GG   ELP+GDVSVT PDV+VEGG
Sbjct: 2192 MAAVGAIGAAVGLSGDKPDAELPSGDVDASVTVPDVPSVDVKKPKKGLFGGLFGSSKAKMEVPDADVAMPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDMDAPSXXXXXXXXXXAGKMPSVEGGFGGELPSGDVSVTTPDVKVEGG 2401

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BLAST of mRNA_Ecto-sp13_S_contig9397.20994.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.240e-9
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0

Query:    1 MAAVGAIGAAVGLSDDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFGGL-------FGSSKAKVE 61
            +A VGAIGAAVGLS DKPDAE+PSG V  S+S+P+  SVD++KP+K +FGGL        G +K K E
Sbjct:  770 VAIVGAIGAAVGLSGDKPDAEVPSGVVHVSLSIPEA-SVDIRKPRKVLFGGLPFKKPPLMGRTKGKHE 836

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9397.20994.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9397.20994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LB94_ECTSI	1.180e-32	95.89	Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ...	[more]
A0A6H5K9M1_9PHAE	1.020e-31	69.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JY67_9PHAE	2.240e-9	57.35	Protein kinase domain-containing protein n=1 Tax=E...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34231	FAMILY NOT NAMED	coord: 65..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9397	contig	Ecto-sp13_S_contig9397:482..1962 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9397.20994.1	mRNA_Ecto-sp13_S_contig9397.20994.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9397 482..1984 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9397.20994.1 ID=prot_Ecto-sp13_S_contig9397.20994.1|Name=mRNA_Ecto-sp13_S_contig9397.20994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
MAAVGAIGAAVGLSDDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGMFG
GLFGSSKAKVEVPDADVSVPEVSADVSVPDVSANVSLPDVSGDVSMPDAS
ADVSVPDVAGSLKVPDVSGDVSVPSVDMDVPLGSAEAPSVDLAGKMPSVK
GGVSELPTGDVSVTAPDVEVEGG