prot_Ecto-sp13_S_contig93916.20989.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig93916.20989.1
Unique Nameprot_Ecto-sp13_S_contig93916.20989.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: A0A6H5JB86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB86_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 3.950e-32
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            APISVGTGTFLSITGEGDSAEVLGGG+TQMFY+SSSGGLTLTDL+LSGGSAASGGAVYASAASVALNSCV
Sbjct:   84 APISVGTGTFLSITGEGDSAEVLGGGQTQMFYISSSGGLTLTDLKLSGGSAASGGAVYASAASVALNSCV 153          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.900e-29
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            APISVG GTFLSITGE DSAEVLGGG+TQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALN+CV
Sbjct:   84 APISVGAGTFLSITGEDDSAEVLGGGQTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNNCV 153          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: D7FRH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH2_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.440e-26
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            APISVGTGTFLSITGE DSAEVLGGG+TQMFYVSSSGGLTLTDL+LSGG+AASGGA+ +S ASV L++CV
Sbjct:   81 APISVGTGTFLSITGEDDSAEVLGGGQTQMFYVSSSGGLTLTDLKLSGGNAASGGAIESSMASVTLDTCV 150          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.150e-25
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            APISVGTGTFLSITGE  SAEVLGGG+TQMFYVSSSGGLTLTDLRLSGGSAASGGA+ +S ASV L++C+
Sbjct:   81 APISVGTGTFLSITGEDGSAEVLGGGQTQMFYVSSSGGLTLTDLRLSGGSAASGGAIESSMASVTLDTCI 150          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.930e-25
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            APISVG GTFLSITGE DSAEVLGGG+T+MFYVSSSGGLTLTDLRLSGGSAASGGA+ +S ASV L++CV
Sbjct:  110 APISVGAGTFLSITGEDDSAEVLGGGQTRMFYVSSSGGLTLTDLRLSGGSAASGGAIESSMASVTLDTCV 179          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.530e-24
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSCV 70
            API+VG GTFLSITGE DSAEV GGG+T+MFYVS+ GGLTLTDL+LSGGSAASGGA+++S A+VALNSCV
Sbjct:   71 APIAVGAGTFLSITGEDDSAEVRGGGQTRMFYVSTLGGLTLTDLKLSGGSAASGGAIHSSMATVALNSCV 140          
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 5.220e-17
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    3 ISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGSAASGGAVYASAASVALNSC 69
            ISVG+GTFLSITGE D+A V GGG+ +MF VS +GGLTLTDL+LSGG AA GGA+ +S A+V LNSC
Sbjct:   74 ISVGSGTFLSITGENDTAGVRGGGQIRMFGVSPAGGLTLTDLKLSGGRAARGGAIRSSMAAVTLNSC 140          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93916.20989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JB86_9PHAE3.950e-3295.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI1.900e-2994.29Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH2_ECTSI2.440e-2684.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS31_9PHAE2.150e-2584.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH0_ECTSI2.930e-2584.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRH3_ECTSI3.530e-2480.00Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH4_ECTSI5.220e-1770.15Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig93916contigEcto-sp13_S_contig93916:186..395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig93916.20989.1mRNA_Ecto-sp13_S_contig93916.20989.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig93916 186..397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig93916.20989.1 ID=prot_Ecto-sp13_S_contig93916.20989.1|Name=mRNA_Ecto-sp13_S_contig93916.20989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
APISVGTGTFLSITGEGDSAEVLGGGRTQMFYVSSSGGLTLTDLRLSGGS
AASGGAVYASAASVALNSCV
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