prot_Ecto-sp13_S_contig939.20985.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig939.20985.1
Unique Nameprot_Ecto-sp13_S_contig939.20985.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length931
Homology
BLAST of mRNA_Ecto-sp13_S_contig939.20985.1 vs. uniprot
Match: D7G4M3_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M3_ECTSI)

HSP 1 Score: 1127 bits (2915), Expect = 0.000e+0
Identity = 695/861 (80.72%), Postives = 714/861 (82.93%), Query Frame = 0
Query:   72 MSGTVAGQAAASSXXXXXXXXXXXXXXXXXXXXXXVVSQVKPDTKATEPARAIEAKGGGDKRATRRSPDPAAATTSAEGIKTKKGQGVSGVERQPTTRPGDGSSRAAGKWKGTPAWRTSPEQGKSATTSRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVRSNGRSSPPSARSPELAETATTPTGTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVDNPASRKPPEPAKAXXXXXXXXXXXXXXXXXXXXXXXXXXGHRSNNDDRMTAMCGSNPFSTTSPHPAKTMTTPRGTASLTVTRVPSSVRQPTTPIPTNHRTPDRAVKVGQGNPASTTSPHPAKTINTPRNTAVSTGNRVFFGSGQPTTPTSFLAARAAKNAKVSPASTPSPHLTKT-VTTPRGTATSASTRVPSSAKQPTTPTARRGNNNGRAVTTGRGNPASTTSPHPAKAATTPKNRAVSTGNRGFFGTGQPATPTTLHAGRTAKDATISPASTPSPHPTKTEVTTSRGTAASTSTRVPSSARQPTTPTSRRGNHKDRVVTIGRGNPASTTSPHPAKVETTPRDRAVSTGNRVFFGPRQPTTPTSLRAAXXAKNAKIISASTPSLQPAEAAVTTPRGMATSASTRVPSSARQPTTPTAHRGISNDGAATDRESQASRRSSEPTGAAKTPRSTPGATRDRISLVARQAAEGIRRRSMSSRASTNRGGKLASGRLPEQADATRPSRTSYLLADASSSVVASNSAQGLGSTSSGGTIEGRHPTAQLSVGAPEDSGSGVEPSPIVPATGEDSLLEAPSASQPSEMEPAXXXXAAQAGGQT-DRHVKRPRSGFAPRPTCSMAEYMMPQIQLLNALQRTVLFNPF 930
            MSGTV G AAASS                      VVSQVKPDTKAT P RAIEAK GGDK ATR+SPDPAAATTS+EGI+TKK QGVSGVERQPT RPG GSS AAGKWKGTPAWRTSPEQGKS TT RNTAVLSGTGAFFVTPEQTSPCELRCKCSRV SNGR SPPSARSPEL ETATTP GTAAST XXXXXXXXXXXXXXXXXXXX      NGVDNPASRKP EPAKA                          GHRSNNDDRM A+C SNP STTSPHPAKT+TTPRGT SLT T V SSVRQP TPIPTNHRT DRAVK+GQGNPASTTSPHPAKT+ TPRNTAVSTGNRVFFGS QPTTPTS  AARAAKNAKVSPASTPSPH TKT VTTPRGTATSASTRVPSSAKQPTTPTARRGNNNGRAVT GRGNP               +NRAVSTGNR FFGT QP TPTTLHA RTAK+A ISPASTPSPHPTKT VTT RGTA S STRVPSSARQ TTPT RRGN KDR VTIGRGNPASTTSPHPAKV TTPRDRAVSTGNRVFFGPRQPTTPTSLRAA  A NAKI SASTPS QPAEAAV TPRGMATSASTR PSSARQ TT T  RG +ND AATDRESQASR SSEPTGAAKTPRS PGATRDRISLVARQAAEGIRRRSMS+RAST+RGGKLASGR PEQADAT PS  + LLAD SSSVVASNSAQGLGSTSSGGTI+GRHP AQ+S GAPEDSGSG+EPSPIVPATGE S+LE PSAS+PSEMEPAXXX AAQAGGQT DR V+RPRS FAPRPTCSMAEYMMPQIQLLNALQRTVL NPF
Sbjct:    1 MSGTVGGHAAASSSAAAGHASADNGAQETP-----VVSQVKPDTKATTP-RAIEAKDGGDKPATRQSPDPAAATTSSEGIRTKKKQGVSGVERQPTPRPGHGSSTAAGKWKGTPAWRTSPEQGKSVTTPRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVHSNGRGSPPSARSPELVETATTPAGTAASTAXXXXXXXXXXXXXXXXXXXXNARAATNGVDNPASRKPSEPAKAATTPRGTAASTGARFSFMAKQLSTTTGHRSNNDDRMAAICRSNPSSTTSPHPAKTVTTPRGTGSLTATGVSSSVRQPKTPIPTNHRTADRAVKIGQGNPASTTSPHPAKTVTTPRNTAVSTGNRVFFGSRQPTTPTSLRAARAAKNAKVSPASTPSPHPTKTAVTTPRGTATSASTRVPSSAKQPTTPTARRGNNNGRAVTAGRGNPXXXXXXXXXXXXXXXRNRAVSTGNRVFFGTRQPTTPTTLHASRTAKNAMISPASTPSPHPTKTAVTTPRGTATSASTRVPSSARQQTTPTGRRGNQKDRAVTIGRGNPASTTSPHPAKVATTPRDRAVSTGNRVFFGPRQPTTPTSLRAARTANNAKISSASTPSPQPAEAAVMTPRGMATSASTRAPSSARQQTTLTGRRGNNNDRAATDRESQASRSSSEPTGAAKTPRSMPGATRDRISLVARQAAEGIRRRSMSARASTDRGGKLASGRSPEQADATTPSGITSLLADTSSSVVASNSAQGLGSTSSGGTIQGRHPRAQVSAGAPEDSGSGMEPSPIVPATGEYSMLEPPSASEPSEMEPAXXXEAAQAGGQTRDRPVQRPRSEFAPRPTCSMAEYMMPQIQLLNALQRTVLLNPF 855          
BLAST of mRNA_Ecto-sp13_S_contig939.20985.1 vs. uniprot
Match: A0A6H5JF45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF45_9PHAE)

HSP 1 Score: 718 bits (1853), Expect = 2.490e-247
Identity = 495/830 (59.64%), Postives = 514/830 (61.93%), Query Frame = 0
Query:  107 VVSQVKPDTKATEPARAIEAKGGGDKRATRRSPDPAAATTSAEGIKTKKGQGVSGVERQPTTRPGDGSSRAAGKWKGTPAWRTSPEQGKSATTSRNTAVLSGTGAFFVTPEQTSPCELRCKCSRVRSNGRSSPPSARSPELAETATTPTGTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVDNPASRKPPEPAKAXXXXXXXXXXXXXXXXXXXXXXXXXXGHRSNNDDRMTAMCGSNPFSTTSPHPAKTMTTPRGTASLTVTRVPSSVRQPTTPIPTNHRTPDRAVKVGQGNPASTTSPHPAKTINTPRNTAVSTGNRVFFGSGQPTTPTSFLAARAAKNAKVSPASTPSPHLTKTVTTPRGTATSASTRVPSSAKQPTTPTARRGNNNGRAVTTGRGNPASTTSPHPAKAATTPKNRAVSTGNRGFFGTGQPATPTTLHAGRTAKDATISPASTPSPHPTKTEVTTSRGTAASTSTRVPSSARQPTTPTSRRGNHKDRVVTIGRGNPASTTSPHPAKVETTPRDRAVSTGNRVFFGPRQPTTPTSLRAAXXAKNAKIISASTPSLQPAEAAVTTPRGMATSASTR-----VPSSARQPTTPTAHRGISNDGAATDRESQASRRSSEPTGAAKTPRSTPGATRDRISLVARQAAEGIRRRSMSSRASTNRGGKLASGRLPEQADATRPSRTSYLLADASSSVVASNSAQGLGSTSSGGTIEGRHPTAQLSVGAPEDSGSGVEPSPIVPATGEDSLLEAPSASQPSEMEPAXXXXAAQAGGQTDRH-VKRPRSGFAPRPTCSMAEYMMPQIQLLNALQRTVLFNPF 930
            VVSQVKPDTK T P RAIE KGGGDK ATR+S DPAAATTS+EG++TKKGQ VSGVERQPT RPG GSSRAAGKWKGTP WRTSPEQGKSAT  RNTA+LSG GAFFVTPEQTSPC+LR KCSRV SN RSSPPSARSP LAETATTPTGTA+ST                              DN            XXXXXXXXXXXXXXXXXX        GHR+NNDDR+ A+  SNP ST SPHP KT+TTPRGTASLT TRVPSS RQ  TPIPTNHR  DRAVK+GQGNPASTTSPHPAKT  TP+NTAVSTGNRV FG+ QPTTP                                                                                                            TLHAGRTAKDATISPASTPSPHPTKT VTT RGTAASTSTRVPSSARQPTTPT RRGNHKDR VTI RGNPASTTSPH AKV TTPRDRA+ TGNR FFGPRQPTTPTSLR     KNAKI SASTPS QPAEAAVTTPRGMATSAST      V SSARQPTTPT  R                         AK    TP ATRDRISLVARQAAE IRRRSMS+RA  NRGGKLASGR P                                   SGGTIEGRH TA+LS GAP D GSGVEPSPIVPA GE SLLEA                    GGQT  H V+RPRS FAPRPTCSMAEYMMPQIQLLNALQRTVL +PF
Sbjct:   23 VVSQVKPDTKETAPVRAIEGKGGGDKPATRQSRDPAAATTSSEGVRTKKGQDVSGVERQPTPRPGHGSSRAAGKWKGTPVWRTSPEQGKSATNPRNTALLSGMGAFFVTPEQTSPCKLRYKCSRVHSNRRSSPPSARSPGLAETATTPTGTASSTAARVP-----------------------ASDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKQLSTTTGHRNNNDDRLAAIGRSNPSSTASPHPVKTVTTPRGTASLTATRVPSSARQIKTPIPTNHRIADRAVKIGQGNPASTTSPHPAKTATTPKNTAVSTGNRVLFGTRQPTTPA-----------------------------------------------------------------------------------------------------------TLHAGRTAKDATISPASTPSPHPTKTAVTTPRGTAASTSTRVPSSARQPTTPTGRRGNHKDRAVTIRRGNPASTTSPHLAKVATTPRDRAILTGNRDFFGPRQPTTPTSLRVVRAVKNAKIGSASTPSPQPAEAAVTTPRGMATSASTASASTLVLSSARQPTTPTGRR-------------------------AKXXXXTPSATRDRISLVARQAAEEIRRRSMSARAFMNRGGKLASGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGTIEGRHATAELSAGAPADPGSGVEPSPIVPAMGEKSLLEA--------------------GGQTRDHPVQRPRSDFAPRPTCSMAEYMMPQIQLLNALQRTVLLSPF 677          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig939.20985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4M3_ECTSI0.000e+080.72Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A6H5JF45_9PHAE2.490e-24759.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig939contigEcto-sp13_S_contig939:7533..10325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig939.20985.1mRNA_Ecto-sp13_S_contig939.20985.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig939 5084..10347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig939.20985.1 ID=prot_Ecto-sp13_S_contig939.20985.1|Name=mRNA_Ecto-sp13_S_contig939.20985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=931bp
MKTVASWLDRESLAELGLLAERKGVAVDGCATKHSVNQALLGSGKVLQPV
ADGLPSALHSGTECGTQGPTSMSGTVAGQAAASSSAAAGHASADNGAQET
PAQETPVVSQVKPDTKATEPARAIEAKGGGDKRATRRSPDPAAATTSAEG
IKTKKGQGVSGVERQPTTRPGDGSSRAAGKWKGTPAWRTSPEQGKSATTS
RNTAVLSGTGAFFVTPEQTSPCELRCKCSRVRSNGRSSPPSARSPELAET
ATTPTGTAASTAARAPASARQPTTLTGLRDSSNARAARNGVDNPASRKPP
EPAKAATTPTGTAAPTEARFSSTAKQLSTTTGHRSNNDDRMTAMCGSNPF
STTSPHPAKTMTTPRGTASLTVTRVPSSVRQPTTPIPTNHRTPDRAVKVG
QGNPASTTSPHPAKTINTPRNTAVSTGNRVFFGSGQPTTPTSFLAARAAK
NAKVSPASTPSPHLTKTVTTPRGTATSASTRVPSSAKQPTTPTARRGNNN
GRAVTTGRGNPASTTSPHPAKAATTPKNRAVSTGNRGFFGTGQPATPTTL
HAGRTAKDATISPASTPSPHPTKTEVTTSRGTAASTSTRVPSSARQPTTP
TSRRGNHKDRVVTIGRGNPASTTSPHPAKVETTPRDRAVSTGNRVFFGPR
QPTTPTSLRAARAAKNAKIISASTPSLQPAEAAVTTPRGMATSASTRVPS
SARQPTTPTAHRGISNDGAATDRESQASRRSSEPTGAAKTPRSTPGATRD
RISLVARQAAEGIRRRSMSSRASTNRGGKLASGRLPEQADATRPSRTSYL
LADASSSVVASNSAQGLGSTSSGGTIEGRHPTAQLSVGAPEDSGSGVEPS
PIVPATGEDSLLEAPSASQPSEMEPAEPAEAAQAGGQTDRHVKRPRSGFA
PRPTCSMAEYMMPQIQLLNALQRTVLFNPF*
back to top