prot_Ecto-sp13_S_contig9372.20971.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9372.20971.1
Unique Nameprot_Ecto-sp13_S_contig9372.20971.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9372.20971.1 vs. uniprot
Match: D8LM35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM35_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 7.710e-108
Identity = 191/205 (93.17%), Postives = 194/205 (94.63%), Query Frame = 0 
Query:    1 MLEASARWGSGARGKEQIAVPVCKVKYQPFREATRGGEKNRRLGGGLAGKGRLGHGAGEAGTSAGDHNRQQQEPHEKMFACHLHHYRRKTNIEKAGPRQGWQSFSAFHGSATAAPXXXXXXXXXXXXXXXXXXIAACESPSEGRSAAGSLPQAPCGEGSGGSGVVTVGAGGRQTTGVEGAXXXXXXXXXAEPDCPPPIKRARVER 205
            MLEASARWGSGARGKEQI+VPVCKVKYQPFREATRGGEKNRRLGGGLAGKGR GHGAGE GTS GDHNRQQQEP EKMFACHLHHYRRK NIEKAGPRQGWQSFSAFHGSATAAPXXXXXXXXXXXXXXXXXX+AACESPSEGRSAAGS+PQAPC EGSGGSGVVTVGAG R TTGVEGAXXXXXXXX AEP CPPPIKR RVER
Sbjct:    1 MLEASARWGSGARGKEQISVPVCKVKYQPFREATRGGEKNRRLGGGLAGKGRRGHGAGEGGTSVGDHNRQQQEPQEKMFACHLHHYRRKKNIEKAGPRQGWQSFSAFHGSATAAPXXXXXXXXXXXXXXXXXXVAACESPSEGRSAAGSVPQAPCDEGSGGSGVVTVGAGRRPTTGVEGAXXXXXXXXVAEPGCPPPIKRPRVER 205
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9372.20971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM35_ECTSI7.710e-10893.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9372contigEcto-sp13_S_contig9372:3491..4135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9372.20971.1mRNA_Ecto-sp13_S_contig9372.20971.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9372 2181..4848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9372.20971.1 ID=prot_Ecto-sp13_S_contig9372.20971.1|Name=mRNA_Ecto-sp13_S_contig9372.20971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
MLEASARWGSGARGKEQIAVPVCKVKYQPFREATRGGEKNRRLGGGLAGK
GRLGHGAGEAGTSAGDHNRQQQEPHEKMFACHLHHYRRKTNIEKAGPRQG
WQSFSAFHGSATAAPPEHSSGGERRTGTTTAAAIAACESPSEGRSAAGSL
PQAPCGEGSGGSGVVTVGAGGRQTTGVEGAAAAAAAAVVAEPDCPPPIKR
ARVERSPKPLMMQQ*
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