prot_Ecto-sp13_S_contig9370.20970.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9370.20970.1
Unique Nameprot_Ecto-sp13_S_contig9370.20970.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 3.340e-93
Identity = 288/398 (72.36%), Postives = 291/398 (73.12%), Query Frame = 0 
Query:    2 SQLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSSIMANSAAESEGRLMSLRKRRNRGRHPRHDDDQEYDTNSEASYDYVRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGYRETXXXXXXXXXXXXXXXXXX-APAFTVGGGNSIGAHGAEFDEEXXXXXXLNESVDVEGQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMKRYRSESVSSSSNDSSLGKTIKSLKRTGGSSQTTRISPTSVADV 398
            SQLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSS MANS AESEGRLMSLRKRR                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RG YRET     XXXXXXXXX     APAFTVGGGNS GAHGAEFDEE      L+ESVDVEG N                                            XXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXX   G KR+RSESVSSSSND+SLGKTIKSLKRTGGSSQTTRISPTSVADV
Sbjct:    3 SQLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSSTMANSPAESEGRLMSLRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHRGVYRETALGATXXXXXXXXXRQAEEAPAFTVGGGNS-GAHGAEFDEEEAEEE-LDESVDVEGHNSNNKNVGISSSLLHGGTAGTWSKRRPAKSHRPSPTKASKAAAIAXXXXXXXARALAWEXXXXXXXXXXXXXXXXXXXXXXXXX---GTKRHRSESVSSSSNDASLGKTIKSLKRTGGSSQTTRISPTSVADV 395
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.600e-21
Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 0 
Query:   25 PGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            P  ENTGRWT DEHRLFLRGLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G
Sbjct:  569 PVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 629
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.890e-21
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 0 
Query:   26 GNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            G+ENTGRWT+DEHRLFL GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:   40 GSENTGRWTADEHRLFLHGLELHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNG 99
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.960e-21
Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   28 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            +NTGRWT DEHRLFLRGLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 61
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC)

HSP 1 Score: 105 bits (261), Expect = 2.280e-21
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0 
Query:   28 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDA 100
            ENTGRWT++EHRLFL+GLE HGKGWK+IATLI++RTVVQIRTHAQKYFQKL+KA+ SG      A  +ST +A
Sbjct:  308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSGAVDGHAALGVSTAEA 380
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 102 bits (253), Expect = 5.700e-21
Identity = 46/58 (79.31%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   28 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 172
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A1E7FR15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR15_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.700e-21
Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 0 
Query:   32 RWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            RWTS+EH LFL+GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:    1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.560e-20
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:   26 GNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            G ENTGRW+ +EHRLFL+GLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+  G
Sbjct:   27 GKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGG 86
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BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A7S2UGN8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGN8_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.130e-20
Identity = 47/58 (81.03%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   28 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKLSKA+ +G
Sbjct:   72 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLSKARQNG 129
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Match: A0A6S8TU06_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8TU06_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.520e-20
Identity = 47/58 (81.03%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   28 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            ENTGRWT+DEHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:  133 ENTGRWTADEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 190
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9370.20970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE34_ECTSI3.340e-9372.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L4H1_9PHAE1.600e-2181.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0GFF0_9STRA1.890e-2181.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
D7G656_ECTSI1.960e-2182.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0S452_THAOC2.280e-2171.23Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A8J9S9N3_PHATR5.700e-2179.31Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A1E7FR15_9STRA8.700e-2179.63Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A6U4FI15_9STRA1.560e-2078.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UGN8_9STRA2.130e-2081.03Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6S8TU06_9STRA2.520e-2081.03Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 29..77
e-value: 2.8E-11
score: 53.5
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 30..74
e-value: 6.6E-12
score: 45.4
NoneNo IPR availableGENE3D1.10.10.60coord: 32..79
e-value: 9.7E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 31..342
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 31..342
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 32..77
e-value: 4.4E-11
score: 40.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 27..79
score: 15.406
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 28..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9370contigEcto-sp13_S_contig9370:1647..6260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9370.20970.1mRNA_Ecto-sp13_S_contig9370.20970.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9370 1621..6260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9370.20970.1 ID=prot_Ecto-sp13_S_contig9370.20970.1|Name=mRNA_Ecto-sp13_S_contig9370.20970.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MSQLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGK
GWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDA
GKPRPASVSRNLRSSIMANSAAESEGRLMSLRKRRNRGRHPRHDDDQEYD
TNSEASYDYVRSSSSTARTRRRRRSVSSGSSGGGGGSSESEEEDGEGGGR
GHRGGYRETTPGTTTTTMMMMVRQAEEAPAFTVGGGNSIGAHGAEFDEEE
AEEEELNESVDVEGQNNNNNRGLSSSLLHGGTAAAAAGAWSKRRSAKSHR
SSPTKASKAAAIAAAGGAADARALAWEAAAAKAAAGEEDQEAAADGVVGG
GAGMKRYRSESVSSSSNDSSLGKTIKSLKRTGGSSQTTRISPTSVADVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf