prot_Ecto-sp13_S_contig9359.20960.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9359.20960.1
Unique Nameprot_Ecto-sp13_S_contig9359.20960.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length658
Homology
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: D8LJZ7_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ7_ECTSI)

HSP 1 Score: 927 bits (2395), Expect = 0.000e+0
Identity = 516/547 (94.33%), Postives = 522/547 (95.43%), Query Frame = 0
Query:  111 MTSTPSATTAGREVSVEDHDPSRPAGLLRLAIVGENADELGLKIAERHGLVATSMDVLMKGRKGRKTDNVKAKAAAEWLGERPASNGGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAASESEGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLAVSGGQQRSSAALRDVDDGPPPAAKAVETSTLPPSTLRDADMMMSPSELAVARAEAADPEPEDLEAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPGGSEEDATAADGGAAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQ 657
            MTSTPSATTAGREV V+DH+PSRPAGLLRLAIVGENADELGL+IAERHGLVATSMD LMKGRKGRKTDNVKAKAAAEWLG  PAS GGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAA+ESEGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLA SGGQQRSSAALRDVDD P P AKA ETS LPPSTLRDADMMMSPSELAVARAEAADPEPE +EAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPG S E        AAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAA+ASAGVNGERASDKAGGGVS APWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDAN  HDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQ
Sbjct:    1 MTSTPSATTAGREVPVQDHEPSRPAGLLRLAIVGENADELGLRIAERHGLVATSMDGLMKGRKGRKTDNVKAKAAAEWLGTCPASTGGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAANESEGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLAASGGQQRSSAALRDVDDAPAPPAKAAETSALPPSTLRDADMMMSPSELAVARAEAADPEPEGVEAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPG-SGEXXXXXXXXAAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAAAASAGVNGERASDKAGGGVSHAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANTFHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQ 546          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A835ZA34_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA34_9STRA)

HSP 1 Score: 193 bits (491), Expect = 9.980e-49
Identity = 189/578 (32.70%), Postives = 264/578 (45.67%), Query Frame = 0
Query:  131 PSRPAGLLRLAIVGENADE-LGLKIAERHGLVATSMDVLMKGRKGRKTDNVKAKAAAEWLGERPASNGGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAASESEGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLAVSGGQQRSSAALRDVDDGPPPAAKAVETSTLPPSTLRDADMMMSPS--------------------------------------ELAVARAEAADPEP-EDLEAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPM----------VPSRITERLSSAASPGGSEEDATAADGGAAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQV 658
            P   +  +R+AI+G+ A++ +   +A ++G  A ++   ++ +KGRKTD VKA  A        AS G VL GFP +  +AEL    G    +LV+L R G     A      GE+  L SR EG+VV++           SA ++LA  GG   ++ +   V   P   A  VE                                                         E  +  A AA P+P  D E  D   +   +  +A     AA+       N       P+Y AVA+   K +                   S+I ++L+S      S       D G   +  + FG L L    ++CL+ AGI+ P+ IQ A M  I  GESV+LHA TGSGKTL FLLPLMQR             A+ G N               P Q+++ +PTRELAVQ+ARE VLL GG T  V+L +D      L+ V APIVVG+AKVL + ++K+RP+ R ++L  +  +V DEVDRLVD LSK+A  +EA++RKRH RPI  LL  +   + E QV
Sbjct:   42 PCHMSAAVRVAIIGDCAEDGVASAVAAKYGAEACNVAAALREKKGRKTDKVKATVARHLADA--ASGGWVLVGFPNSVPEAELFASSGDNFTKLVVL-RTGEGQAAAT-----GEMASLISRFEGQVVEVNG--------GSAEAVLAAIGGASNAANSDAVVASQPMAPAAPVELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQVMLDAAAALPQPPSDAEEGDAAPSPQLSAIEASMESIAAL-------NTPAAPSIPWYAAVAKPTKKVKXXXXXXXXXXXXXXXDSAASKIVQQLAST-----STGKKLNGDLGTDADASVAFGELELRGAMAECLVKAGISTPSPIQAASMSRIATGESVMLHAETGSGKTLAFLLPLMQRI------------AATGAN--------------KPLQVMVVVPTRELAVQIAREAVLLGGGATKGVDLFLDQQAGVTLADVKAPIVVGTAKVLAQAVKKTRPSERVELLANLSAVVCDEVDRLVDTLSKYATKREADQRKRHPRPIMPLLTALKTRHPELQV 565          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A7S2Y0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0L3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.420e-24
Identity = 97/288 (33.68%), Postives = 140/288 (48.61%), Query Frame = 0
Query:  378 DTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPGGSEEDATAADGGAAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQR--WTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDAN------------NL---HDLSKVTAPIVVGSAKVLERRIRKSRPTV--REDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALL 646
            + P+Y+ +    P+A   P +P++PSRI E             DA +          L+FGPL L S  +  L  AGIT P+ IQ   M  I  G + ++HA TGSGKTL +LLPL+    W+                                P QLL+  P RELAVQ+ RE+V+L GG +  VEL+++              NL   H   +  APIVV +A+ +E  ++ S+     + + L  I+ +V+DEVDRL+D L K+A  KE  +R+ H RP + LL
Sbjct:  187 EEPYYMRLKTKTPRAPAAP-LPIIPSRIQE------------VDAQSLKAMREQVEPLEFGPLTLRSSMAAALRQAGITTPSPIQANAMTAIRQGSNAVVHAETGSGKTLAYLLPLLMDMDWST-------------------------------PRQLLVVAPGRELAVQIGREMVVLLGGRSDLVELVLEGKPKTVQGGNQREKNLASGHPALRTQAPIVVATARQMEIALKTSKKFEEHKTNFLKSIRTVVLDEVDRLIDPLPKYATLKERRQRELHPRPASTLL 430          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A4D9CQ85_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ85_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.370e-18
Identity = 85/242 (35.12%), Postives = 114/242 (47.11%), Query Frame = 0
Query:  440 LVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLL----------SGGLTASVELLVDANNLHD---LSKVTAPIVVGSAKVLERRIRKSRPT--------------VREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANG 654
            L+L  P S  L  AGITE T +Q+A    I+ G  V+LHA TGSGKTL +LLPL+    P L S                           P QLL+  PTRELAVQV R V  L           GG   SV LL+          L  +TAP+VVG+AKVL + + ++  T                      ++ +VVDEVDR +  L ++A AKE +++ RH +P   L+E ++   G
Sbjct:  166 LLLPPPLSLSLRRAGITEATPVQEAAFPQIMRGHHVLLHAQTGSGKTLAYLLPLL---LPVLSSP-------------------------LPRQLLVVCPTRELAVQVGRVVRDLLQGEGGGRRGEGGGEESVALLIQEGEEGAPPVLPSLTAPVVVGTAKVLWKEMERANRTEAGGRERGRGXXXXXXRAWAKNLRAVVVDEVDRCLSPLGQYATAKEKKQKARHPKPAVLLVEELMRGKG 379          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: L1IIC7_GUITC (Helicase ATP-binding domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IIC7_GUITC)

HSP 1 Score: 85.9 bits (211), Expect = 9.070e-14
Identity = 67/224 (29.91%), Postives = 106/224 (47.32%), Query Frame = 0
Query:  437 FGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGG-----LTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRIRKSRPTVRE-----DVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVL 650
            F  L+      + L A G++ P  IQ   +  I++G SVI+ + TGSGKTL +L+PL  R+  G                              P + L+  PTRELA+Q+  E V   G      +    E   D   L  + K T PIV+ +      R +    T+R+      +L  ++ +V+DEVD+L++ L+KHAP K+ + RK H  P + +++R+L
Sbjct:  131 FAGLMCTPQVHEKLQAIGVSTPLPIQHVAIPSIMSGRSVIVQSPTGSGKTLAYLMPLFARFEEG----------------------------SKPRRGLIVAPTRELALQILSECVRYRGAGFGMMIVGGTERFED--QLDKMMKTTCPIVICTPD----RYQSILATIRDKDQLQQLLGNLEVMVLDEVDKLLNPLNKHAPLKKVKMRKAHPMPTSLMMQRIL 320          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A8J6C5F0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5F0_DIALT)

HSP 1 Score: 82.4 bits (202), Expect = 8.860e-13
Identity = 69/214 (32.24%), Postives = 98/214 (45.79%), Query Frame = 0
Query:  440 LVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRI--RKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAP----AKEAEKR-KRHARPIAALL 646
            L + +  S  LLA GI  PT IQ A    +  GESV+LHA TGSGK+L FLLPL+ R  P                                 ++L+  PTRELAVQ+  +   ++  L  SV+L +        +  TA ++VG+   LE  +   +    +    + +++ +V+DEVDRL+ V     P    AK A  R K H  P   LL
Sbjct:   51 LPMPAALSAALLARGIRAPTPIQSAAFSRVAGGESVVLHAETGSGKSLAFLLPLLLRLAP-------------------------------DEKVLIVAPTRELAVQLGADAAGITAELGGSVQLAIVGTAPTVDALATARVLVGTPAELEYALCGTQHASELAARFVGKLRAVVLDEVDRLLPVTQTFGPQAARAKRASNRAKEHVSPTEVLL 233          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A7R9Y9J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.340e-12
Identity = 69/207 (33.33%), Postives = 98/207 (47.34%), Query Frame = 0
Query:  431 VNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSG----GLTASVELLVDANNLHDLS--KVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKE 631
            V  R  F  L +    +D + + GI +P+ IQQ  +  +L G   +LHA TGSGKTL FLLP + +                 V+  RA          AP QLL+  PTREL VQ+A E + L G       A+  LLV   +  D S  ++  P+V  +     R + +      +  L  +K +V+DEVDRL+   SKHAP  +
Sbjct:   41 VKLRASFAELGVPEDLADGVESMGIWKPSPIQQVALPHLLVGRHGLLHAETGSGKTLAFLLPALTK-----------------VDFFRA----------AP-QLLVLAPTRELVVQIAAEALRLLGIDAEDAPATAALLVGRGDFVDASFAELETPLVFATGTEALRALERMSQAQLKVFLDDLKVLVLDEVDRLLKPPSKHAPLSQ 219          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A7S1N315_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N315_9EUGL)

HSP 1 Score: 81.3 bits (199), Expect = 2.350e-12
Identity = 60/196 (30.61%), Postives = 99/196 (50.51%), Query Frame = 0
Query:  433 TRLD---FGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDA-----NNLHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLV 620
            TR+D   + P + D+   +    AG  +PT IQ+  M P++ G+ V++HA TGSGKTL FL+P++ R +P                               P+Q ++ +P+RELA+Q A+ V  L      +V ++V       N    L K    I+VGS K L++ +    P+ R+++L  ++ +V+DEVD L+
Sbjct:   89 TRIDKKEWPPYLRDTLVENAK-QAGYEKPTSIQRNTMSPLMKGKDVMMHAETGSGKTLAFLMPIISRSSPDT-----------------------------PFQTMILVPSRELAIQTAQVVTELWDLGGEAVGVVVPGAGSIENQHRKLLKTKPAIIVGSVKQLDKLLES--PSRRDELLANLRVVVLDEVDALL 252          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A7S2TJU3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJU3_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 5.860e-12
Identity = 68/202 (33.66%), Postives = 87/202 (43.07%), Query Frame = 0
Query:  436 DFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLP---RIKCIVVDEVDRLVDVLSKHAPAKEAEK 634
            DF  + L       L   GI EPT IQ AG+G I  GE+ ILHA TGSGKTL FLLP + +                                     +LL  PTRELAVQ+A E   L         ++  A+ LH   K    IV    ++LE R RK    V    +P    I  +V+DEVD L+     + P  +A+K
Sbjct:   14 DFREIPLSESVLRSLEERGIEEPTPIQAAGLGRIYGGETAILHAETGSGKTLAFLLPAIAKLQEN------------------------------KGSVLLVAPTRELAVQLASEAANLVEDPDTVQLIVAGASPLHKSLKKAKMIVGTPGEILEWRARKDGEPVELYDMPFLHDISMVVLDEVDFLLPTKKFYGPRAKAKK 185          
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Match: A0A8J5XIK8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIK8_DIALT)

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-11
Identity = 78/236 (33.05%), Postives = 108/236 (45.76%), Query Frame = 0
Query:  437 FGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVAREVVLL------------SGGLTAS----------VELLV---DANNLHDLSKV-TAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALL 646
            F  L + +     L + GI+ PT IQ A   P+  G S +LHA TGSGKTL FLLPL+ R                G  GE   D+A       P ++++ +P +ELAVQ+A E  LL            SG   A           V LL+   +A +  +  +V TA ++V +   L   +R +R      VL    C+V+DE D L+  LSK+A   +  KR  H RP A  L
Sbjct:   68 FAGLPVPAAVLGALASRGISSPTPIQLAATAPLARGASALLHAPTGSGKTLAFLLPLVARLH-------------GGCEGEGEGDEAAD-----PGRVIVLVPGQELAVQIAAEARLLFAAYRDAADAAASGAARAGGGGERVAPLRVGLLLKPHEALSAAEAGEVATASLLVCTPNPLLSAVRSARLA---PVLSLCGCVVLDEADALLQPLSKYATRADKLKRAAHPRPAALAL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9359.20960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ7_ECTSI0.000e+094.33DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835ZA34_9STRA9.980e-4932.70P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2Y0L3_9STRA1.420e-2433.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CQ85_9STRA2.370e-1835.12Helicase ATP-binding domain-containing protein n=1... [more]
L1IIC7_GUITC9.070e-1429.91Helicase ATP-binding domain-containing protein n=2... [more]
A0A8J6C5F0_DIALT8.860e-1332.24Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7R9Y9J9_9STRA2.340e-1233.33Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1N315_9EUGL2.350e-1230.61Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2TJU3_9EUKA5.860e-1233.66Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A8J5XIK8_DIALT1.300e-1133.05Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 454..657
e-value: 1.6E-11
score: 54.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 466..645
score: 13.483
NoneNo IPR availableGENE3D3.40.50.300coord: 419..645
e-value: 4.3E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 442..621
NoneNo IPR availablePANTHERPTHR24031:SF346DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 442..621
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 459..622
e-value: 2.9E-17
score: 63.0
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 435..463
score: 6.555
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 430..622

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9359contigEcto-sp13_S_contig9359:3321..6065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9359.20960.1mRNA_Ecto-sp13_S_contig9359.20960.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9359 3321..6065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9359.20960.1 ID=prot_Ecto-sp13_S_contig9359.20960.1|Name=mRNA_Ecto-sp13_S_contig9359.20960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=658bp
QHLTSQRFTCSKLKVLTMRLVPAAGGTFLVVPHVVGFAVRPFEAATMAAV
PRQPFAVVRRHPAAVATASASPRMCYDGRGWLECSRTSRKRPWWATKAAA
TPSRSSTAVSMTSTPSATTAGREVSVEDHDPSRPAGLLRLAIVGENADEL
GLKIAERHGLVATSMDVLMKGRKGRKTDNVKAKAAAEWLGERPASNGGVL
TGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAASESEGGELHLLTS
RLEGKVVKLPSQQDVDSLCDSAASLLAVSGGQQRSSAALRDVDDGPPPAA
KAVETSTLPPSTLRDADMMMSPSELAVARAEAADPEPEDLEAADHRRARS
RAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPM
VPSRITERLSSAASPGGSEEDATAADGGAAVNTRLDFGPLVLDSPASDCL
LAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPG
LLSTSAAASASAGVNGERASDKAGGGVSGAPWQLLLALPTRELAVQVARE
VVLLSGGLTASVELLVDANNLHDLSKVTAPIVVGSAKVLERRIRKSRPTV
REDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVL
AANGEAQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase