prot_Ecto-sp13_S_contig9356.20957.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9356.20957.1
Unique Nameprot_Ecto-sp13_S_contig9356.20957.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9356.20957.1 vs. uniprot
Match: A0A6H5KN12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 6.890e-58
Identity = 119/154 (77.27%), Postives = 121/154 (78.57%), Query Frame = 0 
Query:    1 MLLSALLLLVSGETAAAPPAAFVGGCRLHLAASESGGRTSLSAGGGGISHARDRVCLMAAAGEDKEEEKIELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTRPASQQESAGAKRKALVGLLGNFVAFLKADDDASPTGNPPTLTAEGRQ 154
            MLLSALLLLV G+TAAAPPA FVGGCRL LAA                SH RDRVCLMA         K+ELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTR ASQQE AGAKRKALVGLLGNFVAFLK DDDASP GNPPTLTAEGRQ
Sbjct:    1 MLLSALLLLVMGKTAAAPPATFVGGCRLRLAAXXXXXXXXXXXXX--XSHNRDRVCLMAXXXXXXXXXKMELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTRAASQQEWAGAKRKALVGLLGNFVAFLKTDDDASPPGNPPTLTAEGRQ 152
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BLAST of mRNA_Ecto-sp13_S_contig9356.20957.1 vs. uniprot
Match: D7G9I8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I8_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 5.450e-31
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0 
Query:    1 MLLSALLLLVSGETAAAPPAAFVGGCRLHLAASESGGRTSLSAGGGGISHARDRVCLMAAAGEDKEEE-KIELAAEV 76
            MLLS LLLLV GETAAAPPAAFVG CRL LAASESGGRT+LSAGGGGIS+AR+RVCLMAAAGEDKEEE K+ELAAEV
Sbjct:    1 MLLSTLLLLVRGETAAAPPAAFVGDCRLRLAASESGGRTALSAGGGGISYARNRVCLMAAAGEDKEEEEKMELAAEV 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9356.20957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN12_9PHAE6.890e-5877.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9I8_ECTSI5.450e-3188.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.854

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9356contigEcto-sp13_S_contig9356:1749..2995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9356.20957.1mRNA_Ecto-sp13_S_contig9356.20957.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9356 1749..2995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9356.20957.1 ID=prot_Ecto-sp13_S_contig9356.20957.1|Name=mRNA_Ecto-sp13_S_contig9356.20957.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
MLLSALLLLVSGETAAAPPAAFVGGCRLHLAASESGGRTSLSAGGGGISH
ARDRVCLMAAAGEDKEEEKIELAAEVVGAVTKATVGFAVDRAAATVSEEQ
GLPPRTRPASQQESAGAKRKALVGLLGNFVAFLKADDDASPTGNPPTLTA
EGRQVCKWGVFTESCMP*
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