prot_Ecto-sp13_S_contig935.20954.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig935.20954.1
Unique Name	prot_Ecto-sp13_S_contig935.20954.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	444

Homology

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BLAST of mRNA_Ecto-sp13_S_contig935.20954.1 vs. uniprot
Match: D8LRD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD8_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 9.300e-232
Identity = 399/443 (90.07%), Postives = 403/443 (90.97%), Query Frame = 0

Query:    1 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSAGQEGECALPLPGSDVGEYLGHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLFNNTGGGLVESAAAGVGARRADGGAGGGDTMRGGGVPTGADVDKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLAEGAARGGSGXXXXXXXXXXXXXXXXXXAEPRDSAXXXXXXXXXXXXXXXXXXSVTSGGMRRGPGGVNETRLPSSCSLSSASAGPLHTLPSQRQEDVLGSSGDGXXXXXXXXNAREYLKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI 443
            MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSW ATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSAGQE ECALPLPGSDVGEYL HTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLFNNTGG                      DTMRGGGVP GADVDKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHM+DLAEGAARGGS XXXXXXXXXXXXXXXX  AEPR+SA      XXXXXXXXXXXX  TSG MRRGPGGVNETRL SSCSLSSASAGPLHTLPSQRQEDVLGSSGDGXXXXXXX NAREYLKGPQRHGDSDDFG+YG+DLLGSHAFDSDLMKLMTAEAI
Sbjct:  460 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWIATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSAGQERECALPLPGSDVGEYLRHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLFNNTGGXXXXXXXXXXXXXXXXXXXXXXDTMRGGGVPRGADVDKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMDDLAEGAARGGSXXXXXXXXXXXXXXXXXAQAEPRESAAPRQSIXXXXXXXXXXXXXATSGSMRRGPGGVNETRLSSSCSLSSASAGPLHTLPSQRQEDVLGSSGDGXXXXXXX-NAREYLKGPQRHGDSDDFGIYGDDLLGSHAFDSDLMKLMTAEAI 901

[Close]

BLAST of mRNA_Ecto-sp13_S_contig935.20954.1 vs. uniprot
Match: A0A6H5J936_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J936_9PHAE)

HSP 1 Score: 630 bits (1625), Expect = 6.410e-214
Identity = 395/509 (77.60%), Postives = 399/509 (78.39%), Query Frame = 0

Query:    1 MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQRLSGSAGQEGECALPLPGSDVGEYLGHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLFNNTGGGLVESAAAGVGARRADGGAGGGD--TMRGGGVPTGADVDKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLAEGAARGGSGXXXXXXXXXXXXXXXXXXA--------------------------------------------------------------EPRDSAXXXXXXXXXXXXXXXXXXSVTSGGMRRGPGGVNETRLPSSCSLSSASAGPLHTLPSQRQEDVLGSSGDGXXXXXXXX--NAREYLKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI 443
            MLTQTGDRGLPAALQAGDP AFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQ LSGSAGQEGECALPLPGSDVGEYL H CRPSTFCQLVVTISRLTDRGTKNFCPTPDASQ ASQDDRWPAMSGLFNNTGG LV SAAAG GAR ADG        TMR    P GADV+KAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLA GAARGGS XXXXXXXXXXX       A                                                              EPR+SA         XXXXXXXXX+ TS  MRRGPGGVNETRL SSCSLSSASAGPLHTL SQRQEDVLGSSGD XXXXXXXX  NARE+LKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI
Sbjct:  657 MLTQTGDRGLPAALQAGDPHAFEGGEAALLRCVEELVTCIRISERDTLARLICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTVTSALLFIYERHGVYSRLYELVAPAQGLSGSAGQEGECALPLPGSDVGEYLRHACRPSTFCQLVVTISRLTDRGTKNFCPTPDASQSASQDDRWPAMSGLFNNTGGDLVGSAAAGAGARLADGXXXXXXXXTMRXXXXPRGADVEKAEEECAGTQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLAVGAARGGSXXXXXXXXXXXXESGYFRGASPLPFLGRTSSQGREHQYRQQYHPPMLPPPDHQQXXQQRQXXXXXXXXXXXXLRDPEGGAQAEPRESAAPRQSIGGSXXXXXXXXXA-TSNSMRRGPGGVNETRLLSSCSLSSASAGPLHTLSSQRQEDVLGSSGDXXXXXXXXXXXNAREFLKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI 1164

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig935.20954.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig935.20954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRD8_ECTSI	9.300e-232	90.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J936_9PHAE	6.410e-214	77.60	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..66
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..108
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..443
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig935	contig	Ecto-sp13_S_contig935:16369..20332 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig935.20954.1	mRNA_Ecto-sp13_S_contig935.20954.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig935 16223..20365 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig935.20954.1 ID=prot_Ecto-sp13_S_contig935.20954.1|Name=mRNA_Ecto-sp13_S_contig935.20954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
MLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLAR
LICSSLVGLLLMLLGRREESIAVAESVAEGVTPTPAITRVMPLSWTATTV
TSALLFIYERHGVYSRLYELVAPAQRLSGSAGQEGECALPLPGSDVGEYL
GHTCRPSTFCQLVVTISRLTDRGTKNFCPTPDASQGASQDDRWPAMSGLF
NNTGGGLVESAAAGVGARRADGGAGGGDTMRGGGVPTGADVDKAEEECAG
TQLAELLASLPPASPPKLSGLVDVESYTDLPSHMNDLAEGAARGGSGGLG
GGGGGGAAAAAGGARAEPRDSAAPRQSIGGSGGGSRGGGGSVTSGGMRRG
PGGVNETRLPSSCSLSSASAGPLHTLPSQRQEDVLGSSGDGGSGGGGGGN
AREYLKGPQRHGDSDDFGMYGEDLLGSHAFDSDLMKLMTAEAI*