prot_Ecto-sp13_S_contig935.20953.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig935.20953.1
Unique Nameprot_Ecto-sp13_S_contig935.20953.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length740
Homology
BLAST of mRNA_Ecto-sp13_S_contig935.20953.1 vs. uniprot
Match: A0A6H5L3E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E1_9PHAE)

HSP 1 Score: 1043 bits (2697), Expect = 0.000e+0
Identity = 577/635 (90.87%), Postives = 588/635 (92.60%), Query Frame = 0
Query:  111 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVVGSSAGG-ASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQIEWEPTPPPSLQQRRAEAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRLHNDTKPQGSSSGVGEGKGGVQSLDGLKGPALVRSSSS-ARGPLTVSGTGEDMAPVVGGFQPPHGKRENDPGGGGAGEGREGDRLQHGSKTQRNSDVGGEKELVHGWGGLKGEAHARSSSVVRGPLTVPGGVEGETVAMGGFQPRHGRSADRNGGGDWEKAESILSDNESRSTPAWQQEPEEHVVPGGSGEWGDGGEVKHDRSRGSRGKKKSQKRTRDWQXXXXXXXXXXXXXXXXXXXXXGHHTRAQHCPSQPHRRRQPDPDNLPPCTNPGCKARRKTHSSNICFYHPDPAHALRNRIKRKDIFLKNRAMEDAG----SWLQNNFDKLEF 739
            MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPV GSSAGG ASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFK LKAGQIEWEPTPPPSLQQR AEAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSL QAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRL   TKPQG SSGVGEGKGGVQS DG KGPALV SSSS ARGPLT+SGT ED+APVVGGFQPPHGK E   GGGGAGEGREGDRLQHGSKTQRNSDVG  KELVHGWGGLKG AHARS SVVRGPLTVPG VEGETVA+G FQ  HGRSADRNGGGD E+AESILSD+ESRSTPAWQ+EPEE VVPGGSGEWGDGGEVKHDRSRGSRGKK SQKRTRDWQ  XXXXXXXXXXXXXXXXXXXGHH RAQ  PSQPHRRRQP PDN+ PCTNP CKA+RKTHSSNICFYHPDPA ALRNR++RKDIFLK  AMEDAG    S L NNFD+ EF
Sbjct:    1 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVGGSSAGGGASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKLLKAGQIEWEPTPPPSLQQRGAEAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLRQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRLRLGTKPQGGSSGVGEGKGGVQSSDGSKGPALVGSSSSLARGPLTLSGTFEDVAPVVGGFQPPHGKTEKKLGGGGAGEGREGDRLQHGSKTQRNSDVGDGKELVHGWGGLKGAAHARSPSVVRGPLTVPGDVEGETVAVGSFQTGHGRSADRNGGGDRERAESILSDDESRSTPAWQEEPEEQVVPGGSGEWGDGGEVKHDRSRGSRGKK-SQKRTRDWQEDXXXXXXXXXXXXXXXXXXXGHHARAQRRPSQPHRRRQPVPDNVLPCTNPACKAKRKTHSSNICFYHPDPAQALRNRMRRKDIFLKTHAMEDAGNDAGSGLHNNFDEPEF 634          
BLAST of mRNA_Ecto-sp13_S_contig935.20953.1 vs. uniprot
Match: D8LRD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD7_ECTSI)

HSP 1 Score: 1027 bits (2655), Expect = 0.000e+0
Identity = 574/650 (88.31%), Postives = 589/650 (90.62%), Query Frame = 0
Query:  111 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVVGSSAGGASV--GVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQIEWEPTPPPSLQQRRAEAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEGXXXXERPPEDNRLHNDTKPQ-GSSSGVGEGKGGVQSLDGLKGPALVRSSSS-ARGPLTVSGTGEDMAPVVGGFQPPHGKRENDPGGGGAGEGREGDRLQHGSKTQRNSDVGGEKELVHGWGGLKGEAHARSSS---VVRGPLTVPGGVEGETVAMGGFQPRHGRSADRNGGGDWEKAESILSDNESRSTPAWQQEPEEHVVPGGSGEWGDGGEVKHDRSRGSRGKKKSQKRTRDWQXXXXXXXXXXXXXXXXXXXXXGH----------HTRAQHCPSQPHRRRQPDPDNLPPCTNPGCKARRKTHSSNICFYHPDPAHALRNRIKRKDIFLKNRAMEDAGS----WLQNNFDKLEF 739
            MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPV GSSAGG+S   GVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQ+EWEPTPPPSLQQR AEAGAGGVQQQ GKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGE XXXX  PPEDNRLH+ T+PQ  SSSG GEGK GVQS  GLK PALVRSSSS ARGPLTVSGTGED+APVVGGF PPH KREND GGGGAGEGR GDRLQHGSKTQR+SDVG  KE+VHGWGGLKG AHARSSS   VVRG LTVPGGVE E V +GGFQ RHGRSADRN GGD E+ ESILSD+ SRSTPAWQ EPEEHVVPGGSGEWGDGGEVK DRSRGSRGKKKSQKRTRDWQXXXXXXXXXXXXXXXXXXXXX            H RAQH PSQPHRRRQPDPDN+PPCTNPGCKARRKTHSSNICFYHPDPAHA RNR++RKDIFLKN A+EDAG+    W  NNFDKLEF
Sbjct:    1 MTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGEVDPVGGSSAGGSSSVGGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRFHSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQMEWEPTPPPSLQQRGAEAGAGGVQQQAGKPPFRPPSTWAEVYNAFHDHYLPADGIARTSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIRLFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGEXXXXXXXPPEDNRLHHGTRPQDSSSSGAGEGKEGVQSSGGLKAPALVRSSSSSARGPLTVSGTGEDVAPVVGGFLPPHRKRENDAGGGGAGEGRGGDRLQHGSKTQRSSDVGDGKEVVHGWGGLKGAAHARSSSSSSVVRGQLTVPGGVESEAVPVGGFQTRHGRSADRNDGGDRERVESILSDDGSRSTPAWQDEPEEHVVPGGSGEWGDGGEVKQDRSRGSRGKKKSQKRTRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARAQHRPSQPHRRRQPDPDNIPPCTNPGCKARRKTHSSNICFYHPDPAHARRNRMRRKDIFLKNHAVEDAGNDAGNWPHNNFDKLEF 650          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig935.20953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3E1_9PHAE0.000e+090.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRD7_ECTSI0.000e+088.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 377..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig935contigEcto-sp13_S_contig935:10215..12434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig935.20953.1mRNA_Ecto-sp13_S_contig935.20953.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig935 8422..12523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig935.20953.1 ID=prot_Ecto-sp13_S_contig935.20953.1|Name=mRNA_Ecto-sp13_S_contig935.20953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=740bp
MSEERGRRKKGVKEEEDTGSSSSRSSKAEAVPEVRALLDEEEQSARAVNS
SSSGSSSSNRRIMGNEIASEDPPAPVTQQNAATVPAHPEGGKPHLGEKSR
PTEQQQQQQPMTLREQLQKLVSQKLAAKGELDHAGLLALETLSKMAPEGE
VDPVVGSSAGGASVGVVDSRPRRILPPGIEKLTKFSGKDPGAVSDVLNRF
HSLVVAALPGSSPGTVNKALNRDVVFVLEGAALKFFKSLKAGQIEWEPTP
PPSLQQRRAEAGAGGVQQQPGKPPFRPPSTWAEVYNAFHDHYLPADGIAR
TSDTLFSLSQAADESVPTLVQRQMGLTNHLSRLIEANGGQTTFWEAIMIR
LFERALRADLQRLQHAEPPCPTFQESVDRADRNALRLEKEKSKRRNDAGE
GGGGGERPPEDNRLHNDTKPQGSSSGVGEGKGGVQSLDGLKGPALVRSSS
SARGPLTVSGTGEDMAPVVGGFQPPHGKRENDPGGGGAGEGREGDRLQHG
SKTQRNSDVGGEKELVHGWGGLKGEAHARSSSVVRGPLTVPGGVEGETVA
MGGFQPRHGRSADRNGGGDWEKAESILSDNESRSTPAWQQEPEEHVVPGG
SGEWGDGGEVKHDRSRGSRGKKKSQKRTRDWQEDQGRKRDRQEDQTPSRD
RQEGHHTRAQHCPSQPHRRRQPDPDNLPPCTNPGCKARRKTHSSNICFYH
PDPAHALRNRIKRKDIFLKNRAMEDAGSWLQNNFDKLEF*
back to top