prot_Ecto-sp13_S_contig9340.20940.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9340.20940.1
Unique Name	prot_Ecto-sp13_S_contig9340.20940.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	103

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.660e-65
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query:    1 MHQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 102
            MHQVTIEHEGTSTVLEVDE+TTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS
Sbjct:   63 MHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 164

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 165 bits (418), Expect = 1.080e-50
Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 102
            HQVTIEHEGT+TVLEV E T+IL+AALD  IDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTA GYALTC T+ RSD TI S+ EDELV AQFS RS
Sbjct:   42 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 142

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.380e-47
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 101
            HQVTI+HEG  TVLEVDESTTILEAALD  IDLPHDC+LGVCLTCPS++VSGEVDQ  GTL+DSV   G+ALTC +Y RSD  +RSVEEDE+V AQF+DR
Sbjct:   51 HQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.990e-44
Identity = 72/101 (71.29%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    1 MHQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 101
            MHQVTIE  G S  LEVDE T++LEAALD  I+LPHDCKLGVCLTCPSK+VSGEVDQ   TL+DSV   GYALTCC++ RSD+ IR+++EDELVGAQF  R
Sbjct:   54 MHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 141 bits (356), Expect = 3.030e-41
Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 102
            ++VTI+HEG  T+L+V +  +IL AALD  IDLPHDCKLGVCLTCPSK+VSG+VDQSDGTL  SV A GYALTC ++  SDV +RS+EEDELV AQFS  S
Sbjct:   43 YKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFSRNS 143

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 129 bits (323), Expect = 3.240e-36
Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFS 99
            ++VTIEH G S V+EV+E  TILE ALD  ID+PHDCKLGVC+TCP+++V+G+VDQSDG L D V A GYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   43 YKVTIEHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 140

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 128 bits (321), Expect = 7.120e-36
Identity = 61/98 (62.24%), Postives = 75/98 (76.53%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFS 99
            ++VTIEH G S V+EV+E  TIL  ALD  ID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V A GYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   46 YKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 127 bits (318), Expect = 1.750e-35
Identity = 61/98 (62.24%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFS 99
            ++VTIEH G S V+EV E  TIL  ALD  ID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V A GYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   41 YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: J3LRB4_ORYBR (Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LRB4_ORYBR)

HSP 1 Score: 127 bits (318), Expect = 2.350e-35
Identity = 61/98 (62.24%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFS 99
            ++VTIEH G S V+EV E  TIL  ALD  ID+PHDCKLGVC+TCP+++V+GEVDQSDG L D V A GYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   51 YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 148

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BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Match: UPI001263B9F0 (ferredoxin C 1, chloroplastic n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263B9F0)

HSP 1 Score: 126 bits (316), Expect = 4.740e-35
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    2 HQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFS 99
            ++V IEHEG ST LEV+   TIL  ALD+ +D+PHDCKLGVC+TCP+K++SG VDQSDG L D V   GYAL C +Y RSD TI+++ EDEL+  Q +
Sbjct:   51 YKVVIEHEGASTELEVEPDETILSKALDSGLDVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVERGYALLCASYPRSDCTIKTIPEDELLSLQLA 148

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9340.20940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KV05_9PHAE	3.660e-65	99.02	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S3UW21_HETAK	1.080e-50	83.17	Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
A0A7S2V4F7_9STRA	3.380e-47	76.00	Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617...	[more]
A0A836CGC2_9STRA	7.990e-44	71.29	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A482SDV3_9ARCH	3.030e-41	68.32	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
A0A8J5WV81_ZIZPA	3.240e-36	62.24	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
Q850T5_ORYSJ	7.120e-36	62.24	Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_...	[more]
UPI001ADA50ED	1.750e-35	62.24	ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy...	[more]
J3LRB4_ORYBR	2.350e-35	62.24	Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 Re...	[more]
UPI001263B9F0	4.740e-35	59.18	ferredoxin C 1, chloroplastic n=1 Tax=Pistacia ver...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 1..101 e-value: 9.3E-25 score: 88.3
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 7..79 e-value: 8.4E-15 score: 54.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 2..91 score: 11.937
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 2..98
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 2..98
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 2..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9340	contig	Ecto-sp13_S_contig9340:2790..5799 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9340.20940.1	mRNA_Ecto-sp13_S_contig9340.20940.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9340 2271..5926 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9340.20940.1 ID=prot_Ecto-sp13_S_contig9340.20940.1|Name=mRNA_Ecto-sp13_S_contig9340.20940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MHQVTIEHEGTSTVLEVDESTTILEAALDNDIDLPHDCKLGVCLTCPSKV
VSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSD
RS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR036010	2Fe-2S_ferredoxin-like_sf