prot_Ecto-sp13_S_contig934.20939.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig934.20939.1
Unique Nameprot_Ecto-sp13_S_contig934.20939.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig934.20939.1 vs. uniprot
Match: D8LMJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ4_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.100e-78
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 MATGPYPSTDEYKPINRAEAPPTAYAVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDRLFVNPFQGR 112
            MATGPYPSTDEYKPINRAEAPPTAYAVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDD+LFVNPFQGR
Sbjct:    1 MATGPYPSTDEYKPINRAEAPPTAYAVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDQLFVNPFQGR 112
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BLAST of mRNA_Ecto-sp13_S_contig934.20939.1 vs. uniprot
Match: D7G417_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G417_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 5.080e-43
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = 0 
Query:   26 AVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDRLFVNP 108
            AV GQP  Q+AEAAP++A PGAPT GMWVEERYCGLTTWLIT+VG  PCSYFCPCDRRTVWV+GG KYNEKGA+ DD LF+NP
Sbjct:   18 AVIGQP--QSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNP 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig934.20939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMJ4_ECTSI1.100e-7899.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G417_ECTSI5.080e-4379.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig934contigEcto-sp13_S_contig934:16642..19176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig934.20939.1mRNA_Ecto-sp13_S_contig934.20939.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig934 16642..19176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig934.20939.1 ID=prot_Ecto-sp13_S_contig934.20939.1|Name=mRNA_Ecto-sp13_S_contig934.20939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MATGPYPSTDEYKPINRAEAPPTAYAVTGQPVPQAAEAAPVMAAPGAPTT
GMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIV
DDRLFVNPFQGR*
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