prot_Ecto-sp13_S_contig9339.20937.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9339.20937.1
Unique Nameprot_Ecto-sp13_S_contig9339.20937.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length326
Homology
BLAST of mRNA_Ecto-sp13_S_contig9339.20937.1 vs. uniprot
Match: D7FYX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX4_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 3.180e-151
Identity = 251/317 (79.18%), Postives = 260/317 (82.02%), Query Frame = 0
Query:   10 RSPTNENVLRKTTRPRQRSVVNRQERALVVWTPPVNAAVVGAEPPALAPAXXXXXXXXXXXSDLMFALGAGTSRYLRTLVFPSSGVENPFPRQTPISEITGLRMATHAHRSTPAVLVLRASQPSPWYPVRLATERCPLPIAPANSASCGEPDEDLPTAAAPPVTEVSIVPNVVGQLDIDLVFPAFGMAVSVRAGRRAAASSSSVFRSLDYSRCDATAAVAGQQPRHSSTESRGRTSATREXXXXXXXXXXXXXXXXXXXGRPQFPLRSASPASRPVAVGVFTYRPVAPSRPLAMENSATDDDLCAVSAMMISPLIPA 326
            RSP++EN+ RKTTRPR RSVVNRQERALVVW PP NAAVVGAE  AL PA  XXXXXXXXX+DLMF LGAGTSRYLRTLVFPSSG  NPFPRQTPISEITGLRMATHAHR TPAVL+L ASQP PW PVRLATERCPLPIAPANSASCGE D++LPTAAA PVT  SIV NVVGQL IDLVFPA G+AVS RAGRRAAA SSSVFRSL+ SRCDATAAVAGQQP HSST SRGRTSAT E                   GRPQ PLRS SPA RPVAVGVF YRPVAPS PLAMENSA DDDLCAVSAM  SPLI A
Sbjct:   24 RSPSDENIHRKTTRPRPRSVVNRQERALVVWNPPANAAVVGAESHALPPAREXXXXXXXXXTDLMFPLGAGTSRYLRTLVFPSSGAANPFPRQTPISEITGLRMATHAHRPTPAVLLLGASQPFPWCPVRLATERCPLPIAPANSASCGEEDKELPTAAAQPVTGASIVANVVGQLGIDLVFPAVGIAVSARAGRRAAAFSSSVFRSLENSRCDATAAVAGQQPHHSSTGSRGRTSATGERRTRKSSRSRSPSLPPRSRGRPQSPLRSVSPAPRPVAVGVFPYRPVAPSSPLAMENSAVDDDLCAVSAMTTSPLISA 340          
BLAST of mRNA_Ecto-sp13_S_contig9339.20937.1 vs. uniprot
Match: A0A6H5K0H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H3_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 2.080e-80
Identity = 174/305 (57.05%), Postives = 188/305 (61.64%), Query Frame = 0
Query:    1 MLAFPHLVD-RSPTNENVLRKTTRPRQRSVVNRQERALVVWTPPVNAAVVGAEPPALAPAXXXXXXXXXXXSDLMFALGAGTSRYLRTLVFPSSGVENPFPRQTPISEITGLRMATHAHRSTPAVLVLRASQPSPWYPVRLATERCPLPIAPANSASCGEPDEDLPTAAAPPVTEVSIVPNVVGQLDIDLVFPAFGMAVSVRAGRRAAASSSSVFRSLDYSRCDATAAVAGQQPRHSSTESRGRTSATREXXXXXXXXXXXXXXXXXXXGRPQFPLRSASPASRPVAVGVFTYRPVAPSRPLAME 304
            ML+ PHLVD RS T+ENV RKTTRPR R+V  +QERALVVWTPP +AA VGAE PAL PA XXXXXXXXXX+          S         S G                     H+H  TPA+LVL  SQPS WYPV LATERCPLPIAPANSASCGE +++ P  AAPPVT VSIVPNVVGQL +D VFPA GMAV                      RCDATAAVAGQQP HSS  SRGRTS T E                   GRPQ PLRS+SPA+RPVAV VF YRPVA SRPLAME
Sbjct:    1 MLSLPHLVDSRSATDENVHRKTTRPRPRNVAKQQERALVVWTPPAHAADVGAESPALVPARXXXXXXXXXXN---------RSHVRSRCRHFSDG---------------------HSHWPTPALLVLGTSQPSLWYPVSLATERCPLPIAPANSASCGEAEDEPPMEAAPPVTGVSIVPNVVGQLGVDFVFPAIGMAV----------------------RCDATAAVAGQQPHHSSAGSRGRTSVTGERRTRNSSRPRSPSPPPRSRGRPQSPLRSSSPATRPVAVRVFPYRPVASSRPLAME 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9339.20937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX4_ECTSI3.180e-15179.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0H3_9PHAE2.080e-8057.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9339contigEcto-sp13_S_contig9339:4933..6302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9339.20937.1mRNA_Ecto-sp13_S_contig9339.20937.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9339 4933..6302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9339.20937.1 ID=prot_Ecto-sp13_S_contig9339.20937.1|Name=mRNA_Ecto-sp13_S_contig9339.20937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
MLAFPHLVDRSPTNENVLRKTTRPRQRSVVNRQERALVVWTPPVNAAVVG
AEPPALAPAQETALVVWSPPSDLMFALGAGTSRYLRTLVFPSSGVENPFP
RQTPISEITGLRMATHAHRSTPAVLVLRASQPSPWYPVRLATERCPLPIA
PANSASCGEPDEDLPTAAAPPVTEVSIVPNVVGQLDIDLVFPAFGMAVSV
RAGRRAAASSSSVFRSLDYSRCDATAAVAGQQPRHSSTESRGRTSATRER
RTRNSSRSRSPSPPPRSRGRPQFPLRSASPASRPVAVGVFTYRPVAPSRP
LAMENSATDDDLCAVSAMMISPLIPA
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