prot_Ecto-sp13_S_contig9335.20934.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9335.20934.1
Unique Nameprot_Ecto-sp13_S_contig9335.20934.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length443
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9335.20934.1 vs. uniprot
Match: A0A6H5KF45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF45_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 4.550e-191
Identity = 349/446 (78.25%), Postives = 360/446 (80.72%), Query Frame = 0 
Query:    1 MPGRDRERTWLQGRLFLVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPSSAELTAAPAALYAENSRPRQGWGAIPRSLIFGRRRGPERHPGSDDNRADVAHHRRCFPHDTTGSSCVRFAPVWVRARGGAVGKRAVGGKRVPPAGQAQEEDGEAEEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SVMDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLLVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPATXXXXXXXXASPLGPMMDKMMTSKMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQARAASWMHVSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMEAMSTK 443
            MP RDRE T  +G+LFLV A    XXXXXXXXXX                        TLPSSAELTAAPAALYAE SRPR+GWGAIP SLIFGRRRGP RHPGSDD+R+D+AHHR C PHDTTGSSCV F PVWVRARGGAVGKRAVGGKR PPAGQAQEEDGEA     XXXXXXXXXXXXXXXXXXXXX    XX                       SVMDTV+LKVVLPQAIKQLAFFLLARWLN SLSP VESQVRAARAIYTVYL+VSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGA ATXXXXXXX ASPLGP+MDKMMTS+MAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQ        VSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSG MEAM+TK
Sbjct:    8 MPRRDRETTRFRGQLFLVAAAATVXXXXXXXXXXGRWTPGSTARSSSSSISSS-----TLPSSAELTAAPAALYAEKSRPRRGWGAIPTSLIFGRRRGPVRHPGSDDDRSDIAHHR-CLPHDTTGSSCVMFPPVWVRARGGAVGKRAVGGKRAPPAGQAQEEDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXVDEAXXAGEGEDAGDEAEEKDPEPSGQEASVMDTVNLKVVLPQAIKQLAFFLLARWLNMSLSPKVESQVRAARAIYTVYLMVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAAATXXXXXXXAASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQ--------VSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGSMEAMATK 439
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BLAST of mRNA_Ecto-sp13_S_contig9335.20934.1 vs. uniprot
Match: D7FLG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG4_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.450e-128
Identity = 205/223 (91.93%), Postives = 209/223 (93.72%), Query Frame = 0 
Query:  221 MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLLVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAPATXXXXXXXXASPLGPMMDKMMTSKMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQARAASWMHVSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMEAMSTK 443
            MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYL+VSQALCMYIRYLIWKK DD EVEVPPPAQLKKLIQDAGKAGVTGNEGAPA  XXXXXXXASPLGP+MDKMMTS+MAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQ        VSFGVLS LDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPME M+TK
Sbjct:    1 MDTVDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKGDDTEVEVPPPAQLKKLIQDAGKAGVTGNEGAPAATXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQ--------VSFGVLSLLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMETMATK 215
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BLAST of mRNA_Ecto-sp13_S_contig9335.20934.1 vs. uniprot
Match: F0YP71_AURAN (Uncharacterized protein HYP6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP71_AURAN)

HSP 1 Score: 56.2 bits (134), Expect = 1.040e-5
Identity = 29/91 (31.87%), Postives = 52/91 (57.14%), Query Frame = 0 
Query:  334 GPMMDKMMTSKMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQARAASWMHVSFGVLSFLDNPLVHIYLLGREAKGNLARPF 424
            G ++DK+ + +  V+ YD+  ++  R  Q  +  +MC+ H+++GM++P++ QA          GV + +  PLV  +LLGR+    L RPF
Sbjct:   20 GALVDKLTSKETTVRDYDLDMVKKGRNSQLGSLALMCFLHIKKGMVQPLVAQA--------VMGVAALVKEPLVQAHLLGRD----LERPF 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9335.20934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KF45_9PHAE4.550e-19178.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLG4_ECTSI1.450e-12891.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YP71_AURAN1.040e-531.87Uncharacterized protein HYP6 n=1 Tax=Aureococcus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012098SRP-independent targeting protein 3PFAMPF10032Pho88coord: 340..433
e-value: 6.7E-15
score: 54.8
IPR012098SRP-independent targeting protein 3PANTHERPTHR28112FAMILY NOT NAMEDcoord: 331..440
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..402
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 403..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..383
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9335contigEcto-sp13_S_contig9335:168..5331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9335.20934.1mRNA_Ecto-sp13_S_contig9335.20934.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9335 168..5331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9335.20934.1 ID=prot_Ecto-sp13_S_contig9335.20934.1|Name=mRNA_Ecto-sp13_S_contig9335.20934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=443bp
MPGRDRERTWLQGRLFLVVAAATVAAAAATAAGRWTPGSTARSSSSSSSI
SSSSSSSSTLPSSAELTAAPAALYAENSRPRQGWGAIPRSLIFGRRRGPE
RHPGSDDNRADVAHHRRCFPHDTTGSSCVRFAPVWVRARGGAVGKRAVGG
KRVPPAGQAQEEDGEAEEAPAEEDDGDAAAAAAAVEEEDVDEAAAAREGE
DAGDEAEEKDPNPSGQEASVMDTVDLKVVLPQAIKQLAFFLLARWLNKSL
SPTVESQVRAARAIYTVYLLVSQALCMYIRYLIWKKDDDAEVEVPPPAQL
KKLIQDAGKAGVTGNEGAPATTTGGGGGAASPLGPMMDKMMTSKMAVKKY
DMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQARAASWMHVSFGVLS
FLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMEAMSTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012098SND3_fun