prot_Ecto-sp13_S_contig93198.20915.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig93198.20915.1
Unique Nameprot_Ecto-sp13_S_contig93198.20915.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length48
Homology
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BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Match: A0A6H5L775_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L775_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.300e-15
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 
Query:    1 MVIGLLAASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ 48
            +V+GLLA SVDPNL TRD RTPLHLA + G KA VLSLLEHGTTIDA+
Sbjct:   35 LVVGLLAGSVDPNLPTRDGRTPLHLAAVAGQKAPVLSLLEHGTTIDAR 82
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BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Match: D7G8R5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R5_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 4.380e-15
Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:    1 MVIGLLAASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ 48
            MV GLLA S DPNL TRD RTPLHL  LTG KALVLSLLEHG T+DA+
Sbjct:   42 MVTGLLAGSFDPNLPTRDGRTPLHLVALTGKKALVLSLLEHGATMDAR 89
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BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Match: D7G8R7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R7_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 3.370e-14
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 MVIGLLAASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ 48
            MV GLLA S DPN+ TRDS TPLHL +L G KALVLSLLEHGTTIDA+
Sbjct:    1 MVTGLLADSFDPNVPTRDSWTPLHLKSLAGQKALVLSLLEHGTTIDAR 48
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BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Match: D7G8R4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R4_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.310e-10
Identity = 32/48 (66.67%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:    1 MVIGLLAASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ 48
            MV+ LLA   D N  TRD RTPLHL  L G KALVLSL E GTTIDA+
Sbjct:    1 MVVDLLAGIFDQNTPTRDGRTPLHLVALAGQKALVLSLQEDGTTIDAR 48
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BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Match: A0A6H5L6H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H6_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.080e-8
Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    7 AASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ 48
            A  VDPNL TRDS TPL L  L G KALVLSLLEHGTT+D +
Sbjct:   30 AGRVDPNLPTRDSWTPLPLKYLAGQKALVLSLLEHGTTVDVR 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93198.20915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L775_9PHAE1.300e-1577.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8R5_ECTSI4.380e-1577.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8R7_ECTSI3.370e-1477.08Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G8R4_ECTSI2.310e-1066.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6H6_9PHAE2.080e-871.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 18..47
e-value: 0.0044
score: 26.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 20..48
e-value: 5.5E-4
score: 20.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 18..48
score: 12.075
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..48
e-value: 8.2E-9
score: 37.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..47
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..48
score: 14.424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig93198contigEcto-sp13_S_contig93198:127..270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig93198.20915.1mRNA_Ecto-sp13_S_contig93198.20915.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig93198 127..294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig93198.20915.1 ID=prot_Ecto-sp13_S_contig93198.20915.1|Name=mRNA_Ecto-sp13_S_contig93198.20915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp
MVIGLLAASVDPNLLTRDSRTPLHLATLTGNKALVLSLLEHGTTIDAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom