prot_Ecto-sp13_S_contig93162.20911.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig93162.20911.1
Unique Nameprot_Ecto-sp13_S_contig93162.20911.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig93162.20911.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.550e-23
Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 0 
Query:   34 MLCTKIRTQAKELAVLTERLQEEAAYSRLVEKRLVELDPEHSLPVTPRHLGRCYPEGTM 92
            MLCTKIR QAKELA LTERLQEEAAYSRLVEKRLVELDPEHSLPVTP HLGR  PE T+
Sbjct:    1 MLCTKIRNQAKELAALTERLQEEAAYSRLVEKRLVELDPEHSLPVTPHHLGRRSPESTI 59
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93162.20911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF5_ECTSI8.550e-2388.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig93162contigEcto-sp13_S_contig93162:82..357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig93162.20911.1mRNA_Ecto-sp13_S_contig93162.20911.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig93162 52..357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig93162.20911.1 ID=prot_Ecto-sp13_S_contig93162.20911.1|Name=mRNA_Ecto-sp13_S_contig93162.20911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MAIRTATPNSNDVDKRSRRSQDEGAGPRETSQKMLCTKIRTQAKELAVLT
ERLQEEAAYSRLVEKRLVELDPEHSLPVTPRHLGRCYPEGTM
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