prot_Ecto-sp13_S_contig92762.20869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig92762.20869.1
Unique Nameprot_Ecto-sp13_S_contig92762.20869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.470e-22
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE+ M+ +Y  EALD TLKDL++NDR FGG  +L SGDWRQ  P++K G+P++ V+ A +SSH WKH
Sbjct:   28 LIIWDELPMTHRYCVEALDRTLKDLMRNDRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKH 98          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.820e-17
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LI+WDEI MS ++S EAL+ TL+DL+ ND   GG  VL+SGD RQ+ PV+K G P+E ++ + +SS LW H
Sbjct:   82 LIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPH 152          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: A0A833W332_PHYIN (ATP-dependent DNA helicase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W332_PHYIN)

HSP 1 Score: 80.5 bits (197), Expect = 8.280e-17
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    8 SLIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            SLI+WDE  M+ ++  EA+D TL+DLLKND+PFGG  +L+SG +RQ  PV+    P+E++  +   S LW+H
Sbjct:  140 SLIVWDEAPMTHRFQYEAVDRTLRDLLKNDKPFGGVTMLLSGVFRQTLPVIPRAGPAEVIAASLKKSTLWRH 211          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI001C3FBCBC (ATP-dependent DNA helicase PIF7-like n=2 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FBCBC)

HSP 1 Score: 82.4 bits (202), Expect = 1.380e-16
Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    8 SLIIWDEIVMSGKYSPEALDSTLKDLLKN-DRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            SLI+WDE  M+ +++ EA+D TL+D+L N   PFGG  V++SGD+RQ+ PV+K GTP++ V+  F SS LW H
Sbjct:  244 SLIVWDEAPMTHRFAFEAVDRTLRDILDNLHEPFGGKVVVLSGDFRQILPVVKKGTPADTVDACFKSSDLWSH 316          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI0010A34E83 (uncharacterized protein LOC114724484 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A34E83)

HSP 1 Score: 82.4 bits (202), Expect = 1.420e-16
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE  M  +Y  EA+D + KD++ +++PFGG C+LM GD+RQ+ PV+  GT + +V  +  SSHLW+H
Sbjct: 1109 LIIWDEAPMIQRYCIEAVDRSFKDIMHSNKPFGGKCMLMGGDFRQILPVIPKGTRAVVVNASISSSHLWRH 1179          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI0010A2E642 (uncharacterized protein LOC114759678 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2E642)

HSP 1 Score: 81.3 bits (199), Expect = 3.610e-16
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE  M  +Y  EA+D T +D++K D+PFGG CV+M GD+RQ+ PV+  G  +++V+ +  SS LW H
Sbjct: 1037 LIIWDEAPMVRRYCVEAVDRTFRDIMKCDKPFGGKCVVMGGDFRQILPVVPKGGRADVVDSSINSSELWNH 1107          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI0010A354B4 (uncharacterized protein LOC114756596 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A354B4)

HSP 1 Score: 80.9 bits (198), Expect = 4.650e-16
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE  M  +Y  EA D TLKD++ ++ PFGG C++M GD+RQ+ PV+  GT + IV  +  SS+LW H
Sbjct:  332 LIIWDEAPMVQRYCIEAFDRTLKDIMHSNAPFGGKCIVMGGDFRQILPVIPKGTRATIVNASINSSYLWNH 402          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI00053FF0F2 (uncharacterized protein LOC104901240 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FF0F2)

HSP 1 Score: 80.9 bits (198), Expect = 4.810e-16
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    8 SLIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            ++IIWDE  M+ +Y  EA+D +L+DL++ND PFGG  ++  GD+RQV PV++ GT +++++ +F+ S +W+H
Sbjct:  282 TIIIWDEAPMTHRYQFEAVDRSLRDLMENDLPFGGKIIVFGGDFRQVLPVVRNGTRTQMIDASFVKSPIWRH 353          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: A0A0R0ITM0_SOYBN (ATP-dependent DNA helicase n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0ITM0_SOYBN)

HSP 1 Score: 80.9 bits (198), Expect = 4.890e-16
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE  M  K+S EALD +LKD++ NDRPFGG  ++  GD+RQ+ PV+  G  S+IV  +  +S++W H
Sbjct:  760 LIIWDEAPMCHKFSYEALDKSLKDIMYNDRPFGGKVIVFGGDFRQILPVVPRGNRSDIVHASLNASYIWDH 830          
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Match: UPI0010A38D09 (uncharacterized protein LOC114754716 n=7 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A38D09)

HSP 1 Score: 80.9 bits (198), Expect = 4.930e-16
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    9 LIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 79
            LIIWDE  M  +Y  EA D TLKD++ ++ PFGG C++M GD+RQ+ PV+  GT + IV  +  SS+LW H
Sbjct: 1072 LIIWDEAPMVQRYCIEAFDRTLKDIMHSNAPFGGKCIVMGGDFRQILPVIPKGTRATIVNASINSSYLWNH 1142          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig92762.20869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V2_9PHAE1.470e-2259.15ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JNR7_9PHAE6.820e-1753.52ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A833W332_PHYIN8.280e-1748.61ATP-dependent DNA helicase n=1 Tax=Phytophthora in... [more]
UPI001C3FBCBC1.380e-1652.05ATP-dependent DNA helicase PIF7-like n=2 Tax=Callo... [more]
UPI0010A34E831.420e-1649.30uncharacterized protein LOC114724484 n=1 Tax=Proso... [more]
UPI0010A2E6423.610e-1649.30uncharacterized protein LOC114759678 n=1 Tax=Proso... [more]
UPI0010A354B44.650e-1650.70uncharacterized protein LOC114756596 n=1 Tax=Proso... [more]
UPI00053FF0F24.810e-1644.44uncharacterized protein LOC104901240 n=1 Tax=Beta ... [more]
A0A0R0ITM0_SOYBN4.890e-1650.70ATP-dependent DNA helicase n=1 Tax=Glycine max Tax... [more]
UPI0010A38D094.930e-1650.70uncharacterized protein LOC114754716 n=7 Tax=Proso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 8..79
e-value: 1.5E-19
score: 70.4
NoneNo IPR availableGENE3D3.40.50.300coord: 2..76
e-value: 8.0E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 7..79
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 7..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig92762contigEcto-sp13_S_contig92762:3..239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig92762.20869.1mRNA_Ecto-sp13_S_contig92762.20869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig92762 3..381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig92762.20869.1 ID=prot_Ecto-sp13_S_contig92762.20869.1|Name=mRNA_Ecto-sp13_S_contig92762.20869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MSSRTPLSLIIWDEIVMSGKYSPEALDSTLKDLLKNDRPFGGTCVLMSGD
WRQVAPVLKFGTPSEIVEHAFLSSHLWKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like