prot_Ecto-sp13_S_contig92652.20854.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig92652.20854.1
Unique Nameprot_Ecto-sp13_S_contig92652.20854.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 116 bits (290), Expect = 7.510e-32
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGH+TT
Sbjct:   63 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTT 120          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: B6TK92_MAIZE (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=B6TK92_MAIZE)

HSP 1 Score: 100 bits (248), Expect = 2.970e-26
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFG 54
            VCALRFTETARARI+ AGGEC+TFDQLALRAP G NTVLLRGPKNAREAVRHFG
Sbjct:    3 VCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFG 56          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 102 bits (254), Expect = 5.640e-26
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            VCALRFTETARARI+ AGGEC+TFDQLALRAPKG+NTVLLRGPK ARE   HFGHR+T
Sbjct:  100 VCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRST 157          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A7S4PTB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PTB8_9DINO)

HSP 1 Score: 99.8 bits (247), Expect = 7.430e-26
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            +CALRFTE ARARI+ AGGEC+TFDQLAL+APKG+N VLLRGPKNAREAV HFGH T+
Sbjct:   24 ICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTS 81          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A812W5V3_SYMMI (RPL18B protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W5V3_SYMMI)

HSP 1 Score: 100 bits (249), Expect = 7.840e-26
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            +CALRFT+ AR+RI  AGGECITFDQLALR+PKG+NTVLLRG KNAREAV HFGHRTT
Sbjct:   46 ICALRFTQDARSRITKAGGECITFDQLALRSPKGSNTVLLRGAKNAREAVSHFGHRTT 103          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.600e-25
Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            VCALRFTE+AR+RI+AAGGEC+TFDQLAL+ P G+N VLLRGPKNAREA RHFGHRTT
Sbjct:  100 VCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTT 157          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.400e-25
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            VCALRFTETARARIL +GGEC+TFDQLALRAPKG+ TVLLRGPK  RE  +HFGHR+T
Sbjct:  100 VCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRST 157          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A0A9PHU7_ARUDO (Pco085865 n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9PHU7_ARUDO)

HSP 1 Score: 98.6 bits (244), Expect = 1.600e-24
Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFG 54
            VCALRFTETARARI+ AGGEC+TFDQLALRAP G NT+LLRGPKNAREAV+HFG
Sbjct:   99 VCALRFTETARARIINAGGECLTFDQLALRAPLGQNTILLRGPKNAREAVKHFG 152          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.810e-24
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHRTT 58
            VCAL+FTE ARARIL AGGE +TFDQLAL+ PKG  TVLLRGPKNAREAVRHFGHR+T
Sbjct:  100 VCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRST 157          
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Match: A0A444CYT4_ENSVE (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444CYT4_ENSVE)

HSP 1 Score: 97.4 bits (241), Expect = 1.870e-24
Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFG 54
            V ALRFTETARARIL AGGEC+TFDQLALRAP G NTVLLRGPKNAREAVRHFG
Sbjct:   64 VTALRFTETARARILKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFG 117          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig92652.20854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D0ZR79_PIG7.510e-3298.28Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
B6TK92_MAIZE2.970e-2690.74Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
F0Y951_AURAN5.640e-2684.48Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S4PTB8_9DINO7.430e-2681.03Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812W5V3_SYMMI7.840e-2682.76RPL18B protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A835ZAE3_9STRA1.600e-2582.76Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
A0A7S3NFY8_9STRA6.400e-2581.03Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A0A9PHU7_ARUDO1.600e-2487.04Pco085865 n=2 Tax=PACMAD clade TaxID=147370 RepID=... [more]
A0A7S2UVJ6_9STRA1.810e-2482.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A444CYT4_ENSVE1.870e-2490.74Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 1..55
e-value: 1.7E-30
score: 105.8
NoneNo IPR availableGENE3D3.100.10.10coord: 1..58
e-value: 2.9E-29
score: 103.9
IPR000039Ribosomal protein L18ePANTHERPTHR1093460S RIBOSOMAL PROTEIN L18coord: 1..56
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig92652contigEcto-sp13_S_contig92652:11..187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig92652.20854.1mRNA_Ecto-sp13_S_contig92652.20854.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig92652 11..187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig92652.20854.1 ID=prot_Ecto-sp13_S_contig92652.20854.1|Name=mRNA_Ecto-sp13_S_contig92652.20854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
VCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAV
RHFGHRTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR000039Ribosomal_L18e
IPR036227L18e/L15P_sf