prot_Ecto-sp13_S_contig9263.20851.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9263.20851.1
Unique Nameprot_Ecto-sp13_S_contig9263.20851.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9263.20851.1 vs. uniprot
Match: D7FTQ1_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTQ1_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 6.600e-59
Identity = 108/128 (84.38%), Postives = 112/128 (87.50%), Query Frame = 0 
Query:    1 MAAWRHALAAGSILVLVSAAAAARPTAGGPGRNRVGGGKPELVEPWGDAGGGMLRSGWGGSRSPADSSVPAGLFLRAMTSLPGHYQDDHEALEAHLREEHAIFTASETPDDASAGGDGGRRR--AHLC 126
            M AWRHALAAGSI+VLVSA AAARPTAGG GRNR GGGKPELVEPWGDAGGG+LRSGWGGSRSPADSSVPAGLF+RAMTSLPGHYQDDHEALEAHLREEHAIF ASETPDDA +          AHLC
Sbjct:    1 MPAWRHALAAGSIVVLVSAEAAARPTAGGSGRNRAGGGKPELVEPWGDAGGGVLRSGWGGSRSPADSSVPAGLFIRAMTSLPGHYQDDHEALEAHLREEHAIFAASETPDDARSXXXXXXXXXXAHLC 128
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BLAST of mRNA_Ecto-sp13_S_contig9263.20851.1 vs. uniprot
Match: A0A6H5KF15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF15_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.400e-23
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:    1 MAAWRHALAAGSILVLVSAAAAARPTAGGPGRNRVGGGKPELVEPWGDAGGGMLRSG 57
            MAAWRHALAAGSI++LVSAAAAARPT GGPGRNR GGGKPE VEPWGDAGG +LRSG
Sbjct:    1 MAAWRHALAAGSIVMLVSAAAAARPTVGGPGRNRAGGGKPEFVEPWGDAGGRVLRSG 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9263.20851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTQ1_ECTSI6.600e-5984.38Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A6H5KF15_9PHAE2.400e-2387.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.859

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9263contigEcto-sp13_S_contig9263:1549..4443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9263.20851.1mRNA_Ecto-sp13_S_contig9263.20851.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9263 1549..4630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9263.20851.1 ID=prot_Ecto-sp13_S_contig9263.20851.1|Name=mRNA_Ecto-sp13_S_contig9263.20851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
MAAWRHALAAGSILVLVSAAAAARPTAGGPGRNRVGGGKPELVEPWGDAG
GGMLRSGWGGSRSPADSSVPAGLFLRAMTSLPGHYQDDHEALEAHLREEH
AIFTASETPDDASAGGDGGRRRAHLC
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