prot_Ecto-sp13_S_contig9250.20836.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9250.20836.1
Unique Nameprot_Ecto-sp13_S_contig9250.20836.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length711
Homology
BLAST of mRNA_Ecto-sp13_S_contig9250.20836.1 vs. uniprot
Match: A0A6H5JYD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD8_9PHAE)

HSP 1 Score: 924 bits (2387), Expect = 0.000e+0
Identity = 580/714 (81.23%), Postives = 596/714 (83.47%), Query Frame = 0
Query:    1 MSMIGWTAEGGIGTSHDRGGDAIVQALRAVAYTEPSDQCPGGNERKGREETEVGQGRRRXXXXXXXXXXXXXXXXARFGGELQWVRRVDEKPAGEECRGEDAHVCSDDRVCGRGHDGLKWRRKNSGGXXXXXWGE----GSREGTASGGERSDGCSADEEVHASKKRRTPSPDPARKSAPAAEDAAHSAIGSSXXXXXXXXPXXXXXXXXXXXXTDMEDRALREAEVIRWCQRVSSPRAMSGDGGAAAGVGGISSSAGGPDEKFFAGRVLEPVPALHWPGTARTRTGGSKVSDAVFGRGEAVTAASSFPPPLRPPCLGFGVDNLSSGGRGDDNHRSGSGSSGGTDATSDFDQCPSSRDEEAMAGVTKAASPPAVKCISRSPLASGFAGAALAXXXXXXXXXXXXXXXXXXXXXXXTAGGSRRSPPSAQEQEGFFNSHTLEPKPRRSWIRTARAEGSAGGETPGAGFSGTAVPKLAHGIPMPPDSQRSDHDASGPAWSRSERREGHNPLCWSGTAGRCPPVFEEGAAGAAVADTESSGSANDWQVRPEAMAGFFTTVGHSAYSPAVLLHSQRRPSPPRLRSPPAIGPAAPAAPAGVGTQPSXXXXXXXXXXXXXXRVAEPTADAERMQQVLGYSPVWGSGXXXXXXXXXXXXXXXXXXXXXVMREGTVPAVSRTNGGCVRDSSSVYSGWDVGSAGAGAAEDESGKEEEGDNSWGW 710
            MSMIGWTAEGG+GTSHDRGGDAIVQALRAVA TEP DQ PGGNERKGRE TEV QGRR XXXXXXXXXXXXXXXXARFGGE QWVRRV+EKP G ECRGEDAHVCSDDRVCGRG DGLKWRRK+SG XXXXX       GSREGT SGGERSDGCSADEEVHA KKRRTPSPD ARKS+PAAEDAAHSA+GSS        P    XXXXXXXX          AEVIRWCQRVSS RAMSGDGGAA GVGGISSSA GPDEKFFAGRVLEPVP+ HWPGTARTRTGGS VSDAVFGRG AVTAASS PPPL+PP LG GV NLSS GRGDDNHRSGSGSSGGTDAT D DQCPSSRDEEAMAGVT+AASPP  KC SR PLASGFAGAALA XXXXXXXXXXXXXXXXXXXXXX    SR+SPPSAQEQ+GF +SHTLEPKPRRSWI  A AEGSA GET GAG SGTAVPK AHGIPMPPDSQRSDHDASGPAWS S+RREGHNPLCWS TAGR PPVFEEGAAGAAVADTESSGSANDWQVRPEAM GFFTTV HSA SPA LLHSQRRPSPPRLRSPPAIGP APAAP  VGTQPS              RVA+PT DAERMQQVLGYSPVWGSGXXXXXXXX             V RE TV AVSRTN GCVR+SSSVYSG DVG AGAGAAEDESG +EEGD+SWGW
Sbjct:  272 MSMIGWTAEGGVGTSHDRGGDAIVQALRAVACTEPPDQWPGGNERKGREGTEVVQGRRXXXXXXXXXXXXXXXXXARFGGEQQWVRRVNEKPTGGECRGEDAHVCSDDRVCGRGQDGLKWRRKSSGXXXXXXXXXXXXXGSREGTTSGGERSDGCSADEEVHAPKKRRTPSPDTARKSSPAAEDAAHSAMGSSSAGAAAARPGAVDXXXXXXXXXXXXXXXXXXAEVIRWCQRVSSARAMSGDGGAAPGVGGISSSAAGPDEKFFAGRVLEPVPSRHWPGTARTRTGGSNVSDAVFGRGAAVTAASSLPPPLQPPYLGLGVGNLSSRGRGDDNHRSGSGSSGGTDATRDSDQCPSSRDEEAMAGVTRAASPPTAKCNSRIPLASGFAGAALASXXXXXXXXXXXXXXXXXXXXXXXXXESRQSPPSAQEQQGFLDSHTLEPKPRRSWILAAGAEGSARGETQGAGASGTAVPKPAHGIPMPPDSQRSDHDASGPAWSGSQRREGHNPLCWSDTAGRNPPVFEEGAAGAAVADTESSGSANDWQVRPEAMVGFFTTVDHSACSPAALLHSQRRPSPPRLRSPPAIGPVAPAAPTEVGTQPSPTAVGAAAAAG---RVAKPTTDAERMQQVLGYSPVWGSGXXXXXXXXTPSAAAA------VTREATVAAVSRTNVGCVRESSSVYSGRDVGWAGAGAAEDESGPKEEGDSSWGW 976          
BLAST of mRNA_Ecto-sp13_S_contig9250.20836.1 vs. uniprot
Match: D7G0U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U5_ECTSI)

HSP 1 Score: 796 bits (2055), Expect = 2.000e-279
Identity = 531/730 (72.74%), Postives = 556/730 (76.16%), Query Frame = 0
Query:    1 MSMIGWTAEGGIGTSHDRGGDAIVQALRAVAYTEPSDQCPGGNERKGREETEVGQG-RRRXXXXXXXXXXXXXXXXARFGGELQWVRRVDEKPAGEECRGEDAHVCSDDRVCGRGHDGLKWRRKNS------------------GGXXXXXWGEGSREGTASGGERSDGCSADEEVHASKKRRTPSPDPARKSAPAAEDAAHSAIGSSXXXXXXXXPXXXXXXXXXXXXTDMEDRALREAEVIRWCQRVSSPRAMSGDGGAAAGVGGISSSAGGPDEKFFAGRVLEPVPALHWPGTARTRTGGSKVSDAVFGRGEAVTAASSFPPPLRPPCLGFGVDNLSSGGRGDDNHRSGSGSSGGTDATSDFDQCPSSRDEEAMAGVTKAASPPAVKCISRSPLASGFAGAALAXXXXXXXXXXXXXXXXXXXXXXXTAGGSRRSPPSAQEQEGFFNSHTLEPKPRRSWIRTARAEGSAGGETPGAGFSGTAVPKLAHGIPMPPDSQRSDHDASGPAWSRSERREGHNPLCWSGTAGRCPPVFEEGAAGAAVADTESSGSANDWQVRPEAMAGFFTTVGHSAYSPAVLLHSQRRPSPPRLRSPPAIGPAAPAAPAGVGTQP-SXXXXXXXXXXXXXXRVAEPTADAERMQQVLGYSPVWGSGXXXXXXXXXXXXXXXXXXXXXVMREGTVPAVSRTNGGCVRDSSSVYSGWDVGSAGAGAAEDESGKEEEGDNSWGW 710
            +SMIGWTAEGGIGT ++RGGDAIVQALRAVAYTEP D+  GGNE+KGRE TE GQG  RR  XXXXXXXXXXXXXX+R GG+ QWVRRVDEK AG +CRG+DAH CSDD VCG GHDGLKWRRK                      XXXXX        T SGGERSDGCSA EEVHASKK RTPSP+ ARKS+ AAEDAA SA+GSS        P  XXXXXXXXXX       LREAEVI+WCQR SSPRA+SGDGGAAA          GPDEKFFA RVL+PVPA HWPGTARTRTGGSKVSDAVFG G A TAASS PPPLRPPCL FGV  LS  GR +DNH SGSGSSGGTDA S  DQ PSSRDE AM GVT+AASPPA KC SRSPLASGFAGAALA  XXXXXXXXXXXXXXXXXXXXX   GS RSPPSA+EQEGFF SHTLEP P RSWI  A   GSAGGET  AG SGT VPK AHGIPMPPDSQRSD DASG A S SERREGHNPLCWS TAGR PP+FEE AAGAAV DTESSGSANDWQVRP AMAGFFTTVGHSA SPA LL SQRRPSPPR+RSPPA+GPAAPA    VG QP S              RVA+PTAD+ER QQ+LG+SPVWGSG XXXXXXX             V REGTVPAVSRTNGG VRDSSSV SGWDVGSAG GAA D SGKEEEGDNSWGW
Sbjct:   83 LSMIGWTAEGGIGTPNERGGDAIVQALRAVAYTEPPDEWSGGNEQKGREGTEGGQGPHRREDXXXXXXXXXXXXXXSRVGGKQQWVRRVDEKSAGGKCRGDDAHACSDDGVCGTGHDGLKWRRKGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSGGERSDGCSAGEEVHASKKHRTPSPESARKSSLAAEDAADSAMGSSNAGAAAARPGAXXXXXXXXXXXXXXXXXLREAEVIQWCQRGSSPRAISGDGGAAA----------GPDEKFFAARVLDPVPARHWPGTARTRTGGSKVSDAVFGWGAAETAASSSPPPLRPPCLRFGVGELSGDGRREDNH-SGSGSSGGTDAASGLDQFPSSRDEAAMVGVTRAASPPAAKCNSRSPLASGFAGAALASAXXXXXXXXXXXXXXXXXXXXXXXTGSGRSPPSAREQEGFFASHTLEPSPGRSWIVAAGEAGSAGGETHRAGASGTTVPKPAHGIPMPPDSQRSDDDASGAAGSGSERREGHNPLCWSDTAGRYPPLFEEVAAGAAVVDTESSGSANDWQVRPGAMAGFFTTVGHSACSPAALLLSQRRPSPPRVRSPPAVGPAAPAR---VGIQPPSTAIVAEAAAEAEAGRVAKPTADSERRQQILGHSPVWGSGGXXXXXXXEGTPAALPAAAV-VTREGTVPAVSRTNGGSVRDSSSVSSGWDVGSAGGGAAGDGSGKEEEGDNSWGW 797          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9250.20836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JYD8_9PHAE0.000e+081.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0U5_ECTSI2.000e-27972.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9250contigEcto-sp13_S_contig9250:712..3272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9250.20836.1mRNA_Ecto-sp13_S_contig9250.20836.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9250 693..5305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9250.20836.1 ID=prot_Ecto-sp13_S_contig9250.20836.1|Name=mRNA_Ecto-sp13_S_contig9250.20836.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=711bp
MSMIGWTAEGGIGTSHDRGGDAIVQALRAVAYTEPSDQCPGGNERKGREE
TEVGQGRRRREDVSGGRNNGGDGGGARFGGELQWVRRVDEKPAGEECRGE
DAHVCSDDRVCGRGHDGLKWRRKNSGGGGGGGWGEGSREGTASGGERSDG
CSADEEVHASKKRRTPSPDPARKSAPAAEDAAHSAIGSSSAGAAAARPGA
ADQPTTVEEETDMEDRALREAEVIRWCQRVSSPRAMSGDGGAAAGVGGIS
SSAGGPDEKFFAGRVLEPVPALHWPGTARTRTGGSKVSDAVFGRGEAVTA
ASSFPPPLRPPCLGFGVDNLSSGGRGDDNHRSGSGSSGGTDATSDFDQCP
SSRDEEAMAGVTKAASPPAVKCISRSPLASGFAGAALASAATAGSAGKAT
TTAATAATAAATAGGSRRSPPSAQEQEGFFNSHTLEPKPRRSWIRTARAE
GSAGGETPGAGFSGTAVPKLAHGIPMPPDSQRSDHDASGPAWSRSERREG
HNPLCWSGTAGRCPPVFEEGAAGAAVADTESSGSANDWQVRPEAMAGFFT
TVGHSAYSPAVLLHSQRRPSPPRLRSPPAIGPAAPAAPAGVGTQPSPTAI
GAAAAAAAVGRVAEPTADAERMQQVLGYSPVWGSGGGGGGGGGADGTPSA
AAAAAAVMREGTVPAVSRTNGGCVRDSSSVYSGWDVGSAGAGAAEDESGK
EEEGDNSWGW*
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