prot_Ecto-sp13_S_contig92488.20833.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig92488.20833.1
Unique Nameprot_Ecto-sp13_S_contig92488.20833.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.520e-34
Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    8 ACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            A   + + + RVVGCTCLGVKHPLFS RRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS
Sbjct: 1614 AAYSELVASARVVGCTCLGVKHPLFSHRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 1685          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: D7FGT6_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT6_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.070e-33
Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0
Query:    8 ACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            A   + + + RVVGCTCLGVKHPLFS RRF+YCVVDEAGQISQPVVLAPLRCA+VFVLVGDHYQLPPLVTSS
Sbjct:  104 AAYSELVASARVVGCTCLGVKHPLFSHRRFEYCVVDEAGQISQPVVLAPLRCADVFVLVGDHYQLPPLVTSS 175          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A067C8Q5_SAPPC (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8Q5_SAPPC)

HSP 1 Score: 110 bits (275), Expect = 1.890e-26
Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 CTYLTKKACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTS 78
            C  L   A +   + A  +VGCTCLG  H LF++RRFDYC+VDEA QI+QPV+L  LRCA+ F LVGDHYQLPPLVT+
Sbjct:  592 CQPLRTTAAIEKVMVAATLVGCTCLGTNHVLFTKRRFDYCIVDEASQITQPVLLGALRCADTFCLVGDHYQLPPLVTA 669          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: T0PNR2_SAPDV (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PNR2_SAPDV)

HSP 1 Score: 108 bits (271), Expect = 6.620e-26
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 CTYLTKKACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTS 78
            C  L   A +   +    +VGCTCLG  H LFS+RRFDYC+VDEA QI+QPV+L  LRCA+ F LVGDHYQLPPLVT+
Sbjct:  971 CHPLRTTAAIETVMVNATLVGCTCLGTNHVLFSKRRFDYCIVDEASQITQPVLLGALRCADTFCLVGDHYQLPPLVTA 1048          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A1W0A2Z6_9STRA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2Z6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.300e-25
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    4 LTKKACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            +T  A + +     ++VGCTCL   H LFS+RRFDYC+VDEA QI+QPVVL  LR AEVF LVGDHYQLPPLVT +
Sbjct:  900 MTTTAEIEELFLQSQLVGCTCLSTNHVLFSKRRFDYCIVDEASQITQPVVLGALRTAEVFCLVGDHYQLPPLVTDA 975          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A484E6F4_BRELC (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6F4_BRELC)

HSP 1 Score: 103 bits (258), Expect = 3.790e-24
Identity = 45/77 (58.44%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    4 LTKKACLRDFLFAIRVVGCTCLGVK-HPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            +++ + +   L   ++VGCTCL V  H LF++RRFD+C+VDEA QI+QP+VL PLRCA+ FVLVGDHYQLPPLV ++
Sbjct: 1087 ISRVSAMEAKLVNSKLVGCTCLSVNSHVLFTKRRFDFCIVDEASQITQPIVLGPLRCADTFVLVGDHYQLPPLVANA 1163          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: H3G6X5_PHYRM (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6X5_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 1.440e-23
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0
Query:   18 RVVGCTCLGVK-HPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            ++VGCTCL V  H LFS+RRFD+C+VDEA QI+QP+VL+ LRCA+ FVLVGDHYQLPPLV ++
Sbjct:   58 QLVGCTCLSVNSHVLFSKRRFDFCIVDEATQITQPIVLSALRCADTFVLVGDHYQLPPLVANA 120          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: D8QPC1_SELML (DNA replication ATP-dependent helicase/nuclease n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPC1_SELML)

HSP 1 Score: 102 bits (253), Expect = 1.790e-23
Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 0
Query:   18 RVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            RVVG TCLG+ H LFSRR+FD C+VDEAGQI+ PV L PLR A  FVLVGDHYQLPPLV S+
Sbjct:  892 RVVGATCLGITHALFSRRKFDVCIVDEAGQITLPVCLGPLRYARAFVLVGDHYQLPPLVQSA 953          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A8K1C8H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8H0_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 1.800e-23
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 0
Query:   18 RVVGCTCLGVK-HPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            +VVGCTCL V  H LFS+RRFD+C+VDEA Q ++PVVL PLRCA+ FVLVGDHYQLPPLV ++
Sbjct: 1110 KVVGCTCLSVNSHVLFSKRRFDFCIVDEATQTTEPVVLGPLRCADTFVLVGDHYQLPPLVVNA 1172          
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Match: A0A0P1B3G7_PLAHL (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3G7_PLAHL)

HSP 1 Score: 102 bits (253), Expect = 1.800e-23
Identity = 44/63 (69.84%), Postives = 55/63 (87.30%), Query Frame = 0
Query:   18 RVVGCTCLGVK-HPLFSRRRFDYCVVDEAGQISQPVVLAPLRCAEVFVLVGDHYQLPPLVTSS 79
            ++VGCTCL V  H LF++RRFD+C+VDEA QI+QP+VL PLRCA+ FVLVGDHYQLPPLV ++
Sbjct: 1123 QLVGCTCLSVNSHVLFAKRRFDFCIVDEATQITQPIVLGPLRCADTFVLVGDHYQLPPLVANA 1185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig92488.20833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHP8_9PHAE1.520e-3486.11DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FGT6_ECTSI1.070e-3383.33DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A067C8Q5_SAPPC1.890e-2661.54DNA replication ATP-dependent helicase/nuclease n=... [more]
T0PNR2_SAPDV6.620e-2661.54DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A1W0A2Z6_9STRA2.300e-2563.16DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A484E6F4_BRELC3.790e-2458.44DNA replication ATP-dependent helicase/nuclease n=... [more]
H3G6X5_PHYRM1.440e-2369.84DNA replication ATP-dependent helicase/nuclease n=... [more]
D8QPC1_SELML1.790e-2374.19DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A8K1C8H0_PYTOL1.800e-2371.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1B3G7_PLAHL1.800e-2369.84DNA replication ATP-dependent helicase/nuclease n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 9..78
e-value: 9.8E-20
score: 71.4
NoneNo IPR availableGENE3D3.40.50.300coord: 4..79
e-value: 2.7E-21
score: 78.1
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 6..77
IPR026851DNA replication ATP-dependent helicase/nuclease Dna2PANTHERPTHR10887:SF433DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2coord: 6..77
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig92488contigEcto-sp13_S_contig92488:51..287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig92488.20833.1mRNA_Ecto-sp13_S_contig92488.20833.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig92488 51..287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig92488.20833.1 ID=prot_Ecto-sp13_S_contig92488.20833.1|Name=mRNA_Ecto-sp13_S_contig92488.20833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
CTYLTKKACLRDFLFAIRVVGCTCLGVKHPLFSRRRFDYCVVDEAGQISQ
PVVLAPLRCAEVFVLVGDHYQLPPLVTSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR026851Dna2
IPR027417P-loop_NTPase