prot_Ecto-sp13_S_contig9244.20826.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9244.20826.1
Unique Nameprot_Ecto-sp13_S_contig9244.20826.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length565
Homology
BLAST of mRNA_Ecto-sp13_S_contig9244.20826.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 1.660e-203
Identity = 406/431 (94.20%), Postives = 408/431 (94.66%), Query Frame = 0
Query:    3 GGVTLAEPLVVAAASSLWILGAPGADGSPAAIDGGGVTGLVDLGEGSSLRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEGRGGALALGGRGSAELENCVVSGNHAQQSGGGFSTQGDGCSLXXXXXXXXXXXXXXXXXXVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXXXXXXXXDCLFDGNSNKFXXXXIRVEEAAAVSLDGTTFLNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSN 433
            GGV LAEPLVVAAASSLWILG PGADGSPAAIDGGGVTGLVDLGEGSSLRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEGRGGALALGG GSAEL+NCVVSGNHAQQSGG FSTQGD    XXXXXXXXXXXXXXXXX VVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDY LTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWN XXXXXXXXX     DCLF+GNSNKF    IRVEE AAVSL GTTF NNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSN
Sbjct:   31 GGVALAEPLVVAAASSLWILGEPGADGSPAAIDGGGVTGLVDLGEGSSLRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEGRGGALALGGGGSAELDNCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYVLTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWNXXXXXXXXXXRVSISDCLFEGNSNKFAGGAIRVEEEAAVSLSGTTFSNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSN 461          
BLAST of mRNA_Ecto-sp13_S_contig9244.20826.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 3.490e-181
Identity = 490/650 (75.38%), Postives = 495/650 (76.15%), Query Frame = 0
Query:    1 WTGGVTLAEPLVVAAASSLWILGAPGADGSPAAIDGGGVTGLVDLGEGSSLR---------------------------------------------------LEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEGRGGALALGGRGSAELENCVVSGNHAQQSGGGFSTQGDGCSLXXXXXXXXXXXXXXXXXXVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSSSNFTGGFAWNGXXXXXXXXXXXXXXDCLFDGNSNKFXXXXIRVEEAAAVSLDGTTFLNNFISSQSGAGSGGAVSVSAGTLTATDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFSYCNFTLNGGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMFLSAATGELDGVTFVGNSVSGG----------------------------------SXXAVFFSSGTNATVTGGVFSSNTATGAGGHVVVADA 565
            WTG VTL EPLVVAAASSLWILGAPGADGSPAA+DGGGV                                                                LEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAAS  YLEGRGGALALGG GSAELENCVVSGNHAQQSGG FSTQGD    XXXXXXXXXXXXXXXXX VVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFL NYYFGDRTFG+GGGVKIIGSYATTTISI DSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSS NFTGGFAWN XXXXXXXXXXXXXX           XXXX            G+TFLNNFISSQSGAGSGGA+SVSAGTL  TDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATF  CNFTLNGGAV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ELDGV FVGNSVSGG                                  S  AVFFS GTNATVTGG+FSSNTATGAGGHVV ADA
Sbjct:  138 WTGAVTLEEPLVVAAASSLWILGAPGADGSPAAMDGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASIIYLEGRGGALALGGGGSAELENCVVSGNHAQQSGGAFSTQGDXXXXXXXXXXXXXXXXXXXXXGVVLEGRSTVWLDGSTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISLSGASNLTVSDSSFLGNYYFGDRTFGIGGGVKIIGSYATTTISIADSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGGAVLESNGVAALSSCNFTGGFAWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXGSTFLNNFISSQSGAGSGGAISVSAGTLIGTDCNFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFLDCNFTLNGGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDGVAFVGNSVSGGRINIDTILVSAYKRPVPLNTLRLSRTNVLSPTNISGGAVFFSLGTNATVTGGLFSSNTATGAGGHVVAADA 786          
BLAST of mRNA_Ecto-sp13_S_contig9244.20826.1 vs. uniprot
Match: A0A2P6MQW3_9EUKA (Protein kinase domain containing protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MQW3_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 5.240e-5
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  215 ISLSGA-SNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGG 302
            +S+ G+ + L V  S+FL     G+   G GG + + G+ AT T+S+ DS+F GN ATDG  +Y+S+   + + RT    N A   GGG
Sbjct:  219 LSVQGSMTQLVVYSSAFL-----GNTATGAGGSIWVFGT-ATPTVSVYDSIFNGNKATDGAAVYVSTQTTIQIFRTTVTYNTASSTGGG 301          
BLAST of mRNA_Ecto-sp13_S_contig9244.20826.1 vs. uniprot
Match: A0A2P6MYA3_9EUKA (Protein kinase domain containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MYA3_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 5.950e-5
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  215 ISLSGA-SNLTVSDSSFLDNYYFGDRTFGLGGGVKIIGSYATTTISITDSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFGGG 302
            +S+ G+ + L V  S+FL     G+   G GG + + G+ AT T+S+ DS+F GN ATDG  +Y+S+   + + RT    N A   GGG
Sbjct:  914 LSVQGSMTQLVVYSSAFL-----GNTATGAGGSIWVFGT-ATPTVSVYDSIFNGNKATDGAAVYVSTQTTIQIFRTTVTYNTASSTGGG 996          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9244.20826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRF9_ECTSI1.660e-20394.20Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JU65_9PHAE3.490e-18175.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6MQW3_9EUKA5.240e-538.20Protein kinase domain containing protein (Fragment... [more]
A0A2P6MYA3_9EUKA5.950e-538.20Protein kinase domain containing protein n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 255..280
e-value: 700.0
score: 8.3
coord: 197..219
e-value: 510.0
score: 9.3
coord: 220..251
e-value: 970.0
score: 7.3
coord: 115..136
e-value: 1900.0
score: 5.3
coord: 431..456
e-value: 2500.0
score: 4.4
coord: 392..430
e-value: 7700.0
score: 0.9
coord: 138..164
e-value: 3900.0
score: 3.0
coord: 515..537
e-value: 590.0
score: 8.9
coord: 334..360
e-value: 220.0
score: 10.6
coord: 48..75
e-value: 3700.0
score: 3.2
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 159..308
e-value: 4.5E-7
score: 29.8
coord: 390..557
e-value: 6.5E-6
score: 26.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 21..255
e-value: 1.2E-8
score: 36.4
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 284..479
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 284..479
NoneNo IPR availablePANTHERPTHR19862:SF14WD REPEAT-CONTAINING PROTEIN 48coord: 32..279
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 32..279
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.529
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 312..561
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 17..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9244contigEcto-sp13_S_contig9244:1942..6434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9244.20826.1mRNA_Ecto-sp13_S_contig9244.20826.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9244 1942..6434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9244.20826.1 ID=prot_Ecto-sp13_S_contig9244.20826.1|Name=mRNA_Ecto-sp13_S_contig9244.20826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=565bp
WTGGVTLAEPLVVAAASSLWILGAPGADGSPAAIDGGGVTGLVDLGEGSS
LRLEGVTLRNASRASGNGGAIRAEAEGCSVVAVDSSFEGNQAASSFYLEG
RGGALALGGRGSAELENCVVSGNHAQQSGGGFSTQGDGCSLVLVGCSLEG
NRAEVEGGGVVLEGRSTVWLDGSTLLENSAGDQGGGVHGVNATVGVVRGS
QLVNNTASYYGGGGISLSGASNLTVSDSSFLDNYYFGDRTFGLGGGVKII
GSYATTTISITDSLFEGNSATDGGGLYISSDYALTVSRTVFHDNVAGFFG
GGAVLESNGVAALSSSNFTGGFAWNGGGALEVEGSRVSISDCLFDGNSNK
FAGGAIRVEEAAAVSLDGTTFLNNFISSQSGAGSGGAVSVSAGTLTATDC
NFENNQAFHDDRYDVETDPLEGGGAVIISDGSNATFSYCNFTLNGGAVGG
ALLVEGSSTATLSNVAFTSNQAGVYGGALSFYEESVCLMNASHVAANTAA
FGGGGMFLSAATGELDGVTFVGNSVSGGSGGAVFFSSGTNATVTGGVFSS
NTATGAGGHVVVADA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence