prot_Ecto-sp13_S_contig9233.20811.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9233.20811.1
Unique Nameprot_Ecto-sp13_S_contig9233.20811.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.130e-59
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 92
            MAAVVRGSNQEW+GMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGH VLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL
Sbjct:  162 MAAVVRGSNQEWNGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHVVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 253          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.470e-55
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 92
            MAAVVRGSN EW+GM+ELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL
Sbjct:  388 MAAVVRGSNLEWNGMRELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 479          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: G4Z294_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z294_PHYSP)

HSP 1 Score: 111 bits (278), Expect = 5.070e-27
Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            + +V+     +W  M+ELP+E+P+   LR+H++FSCPVS+E ST DNPP+LLKCGH + RS V R + N +R FKCPTCPVEQ E+ET  L
Sbjct:  358 LVSVIDSKLTDWGSMEELPVEIPIAKELRFHNVFSCPVSKEESTPDNPPILLKCGHVICRSCVKRFSYNMTRRFKCPTCPVEQAESETRKL 448          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A0P1AZT3_PLAHL (Rmd5 family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZT3_PLAHL)

HSP 1 Score: 110 bits (274), Expect = 1.790e-26
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0
Query:   11 EWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            +WD M+ELP+E+P+P   R+H++FSCPVS+E ST +NPP+LLKCGH +  S V R + N +R FKCPTCP+EQ E ET+ L
Sbjct:  363 DWDRMEELPVEIPIPQEFRFHNVFSCPVSKEESTPNNPPILLKCGHVICHSCVKRFSYNMTRRFKCPTCPIEQTEEETLKL 443          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A2P4Y823_9STRA (RMD5 family protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y823_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.420e-26
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            + AV+     +W  M+ELP+E+P+   LR+H++FSCPVS+E ST +NPP+LLKCGH + RS V R + N +R FKCPTCP+EQ E+ET  L
Sbjct:  352 LIAVMDSKLADWASMEELPVEIPIAKELRFHNVFSCPVSKEESTPENPPILLKCGHVICRSCVKRFSYNMTRRFKCPTCPIEQTESETRKL 442          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A484E8Z1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8Z1_BRELC)

HSP 1 Score: 108 bits (271), Expect = 3.730e-26
Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            +A+V+     +W+ ++ELP+E+P+    R+HS+FSCPVS+E ST +NPPVLLKCGH +  S V R++ N SR FKCPTCPVEQ E++T  L
Sbjct:  327 LASVMDSKLADWNNLEELPVEIPIAKEFRFHSVFSCPVSKEESTPENPPVLLKCGHVICHSCVKRISYNLSRQFKCPTCPVEQTESDTCKL 417          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A015LDZ0_RHIIW (Ubiquitin-protein ligase RMD5 n=8 Tax=Glomeraceae TaxID=36751 RepID=A0A015LDZ0_RHIIW)

HSP 1 Score: 106 bits (265), Expect = 1.220e-25
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETM 88
            MA +++    EW    ELP+EVPLP  +RYHS+F+CPVS+E ST  NPP++L CGH +   S+++L+R  SRFKCP CP E + N+ +
Sbjct:  262 MATIMKEKKNEWSQQDELPVEVPLPDYMRYHSIFACPVSKEQSTEKNPPMMLPCGHVICHESLNKLSRGNSRFKCPYCPHESIANQAL 349          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: D0NTQ2_PHYIT (RMD5 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NTQ2_PHYIT)

HSP 1 Score: 107 bits (266), Expect = 2.490e-25
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            + +V+     +W  M ELP+E+P+   LR+H++FSCPVS+E ST +NPP+LLKCGH +  S V R + N +R FKCPTCPVEQ E+ET  L
Sbjct:  355 LVSVMSSKLADWGNMDELPVEIPIAKELRFHNVFSCPVSKEESTPENPPILLKCGHVICHSCVKRFSYNMTRRFKCPTCPVEQTESETRKL 445          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A2D4CM94_PYTIN (RMD5 family protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CM94_PYTIN)

HSP 1 Score: 106 bits (265), Expect = 2.610e-25
Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    1 MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSR-FKCPTCPVEQMENETMPL 90
            + AV+      WD ++ELP+E+P+P   RYH++F+CPVS+E ST  NPP+LLKCGH + +S V R++ N +R FKCPTCPVEQ E ET  L
Sbjct:  324 LVAVMDTKVTNWDTLEELPVELPIPDEHRYHTVFACPVSKEESTPSNPPILLKCGHVICKSCVKRISFNMTRRFKCPTCPVEQTECETREL 414          
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Match: A0A5C3NDJ9_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NDJ9_9AGAM)

HSP 1 Score: 104 bits (260), Expect = 9.850e-25
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    4 VVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVE 81
            ++R    EW    ELP+E+PLPP  RYHS+F+CPVS+E ST  NPPV++ CGH + + S+ +L+RNG R KCP CPVE
Sbjct:  298 LMRERKSEWSQTDELPIEIPLPPENRYHSIFACPVSKEQSTDQNPPVMMACGHVIAKDSLQKLSRNGGRIKCPYCPVE 375          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9233.20811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT28_ECTSI4.130e-5997.83RING-Gid-type domain-containing protein n=1 Tax=Ec... [more]
A0A6H5K8M5_9PHAE1.470e-5596.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
G4Z294_PHYSP5.070e-2754.95Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A0P1AZT3_PLAHL1.790e-2658.02Rmd5 family protein n=1 Tax=Plasmopara halstedii T... [more]
A0A2P4Y823_9STRA3.420e-2653.85RMD5 family protein n=3 Tax=Phytophthora TaxID=478... [more]
A0A484E8Z1_BRELC3.730e-2653.85Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A015LDZ0_RHIIW1.220e-2550.00Ubiquitin-protein ligase RMD5 n=8 Tax=Glomeraceae ... [more]
D0NTQ2_PHYIT2.490e-2552.75RMD5 family protein n=2 Tax=Phytophthora infestans... [more]
A0A2D4CM94_PYTIN2.610e-2553.85RMD5 family protein n=1 Tax=Pythium insidiosum Tax... [more]
A0A5C3NDJ9_9AGAM9.850e-2555.13Uncharacterized protein n=1 Tax=Heliocybe sulcata ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 29..91
e-value: 2.3E-7
score: 31.9
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 36..76
e-value: 2.4E-6
score: 27.4
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 1..87
NoneNo IPR availablePROSITEPS51867ZF_RING_GIDcoord: 36..78
score: 10.778
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 31..89
IPR027711Rmd5PANTHERPTHR12170:SF3SPORULATION PROTEIN RMD5coord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9233contigEcto-sp13_S_contig9233:794..1634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9233.20811.1mRNA_Ecto-sp13_S_contig9233.20811.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9233 2..3473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9233.20811.1 ID=prot_Ecto-sp13_S_contig9233.20811.1|Name=mRNA_Ecto-sp13_S_contig9233.20811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MAAVVRGSNQEWDGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPV
LLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR027711Rmd5