prot_Ecto-sp13_S_contig9229.20806.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9229.20806.1
Unique Nameprot_Ecto-sp13_S_contig9229.20806.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9229.20806.1 vs. uniprot
Match: D8LQK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK3_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 8.250e-39
Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 VNGDWVDGEEGHHVAGETLTRTYNVTNKGTTTLSNVCVIDEKFGEDCLACVVSDNGKLPPGDSFVCA 67
            VNGDWVDGEEGHHVAGETLTRTYNVTN+GTTTLSNVCVIDEKFGEDCLACVVSDNGKLPPGDSFVC+
Sbjct:  251 VNGDWVDGEEGHHVAGETLTRTYNVTNRGTTTLSNVCVIDEKFGEDCLACVVSDNGKLPPGDSFVCS 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9229.20806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQK3_ECTSI8.250e-3997.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001434Domain of unknown function DUF11TIGRFAMTIGR01451TIGR01451coord: 15..40
e-value: 6.9E-5
score: 20.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9229contigEcto-sp13_S_contig9229:4704..4904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9229.20806.1mRNA_Ecto-sp13_S_contig9229.20806.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9229 4704..4904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9229.20806.1 ID=prot_Ecto-sp13_S_contig9229.20806.1|Name=mRNA_Ecto-sp13_S_contig9229.20806.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
VNGDWVDGEEGHHVAGETLTRTYNVTNKGTTTLSNVCVIDEKFGEDCLAC
VVSDNGKLPPGDSFVCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001434DUF11