prot_Ecto-sp13_S_contig9222.20801.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9222.20801.1
Unique Nameprot_Ecto-sp13_S_contig9222.20801.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: D7FIH8_ECTSI (Coated vesicle membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH8_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.160e-73
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0
Query:    1 MPSWYAKESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            MPSWYAKESGYKTFGFGLRLGKDV+DLQSMADVSVEDKVMASFL EEAD+LVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL
Sbjct:  177 MPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A836CQY8_9STRA (Transmembrane emp24 domain-containing protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQY8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.490e-11
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   44 LTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            + + ++ LV  L    DH++YMR RE+ HRE +  T+ RL+  T  EA +LV ++  Q+SYIR+FFE KR++
Sbjct:    1 MIDASEELVNDLYTMVDHQTYMRQREQSHRETIDSTNRRLLLWTIAEALLLVSMAMWQVSYIRQFFEVKRMM 72          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: B8C202_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C202_THAPS)

HSP 1 Score: 65.5 bits (158), Expect = 4.940e-10
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 0
Query:    6 AKESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            AK+   +  GF +R+      L   A     D  + S L E +D L+E L    DH+ YMRGRE  H      T +R++  T +EA VL+ +S+ Q+ Y+++FFETKR L
Sbjct:  116 AKDGIDREVGFAIRVLPPQRGLDGEAG---PDDRLTSHLIEMSDKLMEGLHTMADHQEYMRGRENRHSVLADTTFNRIVQWTVLEAVVLILISFGQVLYLKKFFETKRHL 222          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A7S1CB01_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB01_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.450e-9
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
Query:    6 AKESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETK 112
            AK    KT  F L  G        +A+V        + L  E   L + ++   D + YMR RE  HR+  + T+SR++W TF+EAAVLV +S  Q+  I   FETK
Sbjct:   14 AKTKTQKTIAFNLHAGASAAGAADLANVG-----HITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 115          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A7S1CB40_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB40_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.740e-9
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0
Query:    6 AKESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETK 112
            AK    KT  F L  G        +A+V        + L  E   L + ++   D + YMR RE  HR+  + T+SR++W TF+EAAVLV +S  Q+  I   FETK
Sbjct:   99 AKTKTQKTIAFNLHAGASAAGAADLANVG-----HITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 200          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A7S1TXQ7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXQ7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.330e-8
Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    7 KESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            K++G    GF  R   ++     +A   +E              +++ L   +DH+SYMR REE HR+  + T+ R++  T VEA VL  ++  Q+ YIR+FFE KR++
Sbjct:  110 KKAGSVEVGFAYRKSAEIKSTTDLAATVME--------------ILQGLQDLSDHQSYMREREELHRDISESTNYRVLVWTLVEAIVLGIMTIWQIMYIRKFFEVKRVV 204          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A7S1YMF7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YMF7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.260e-8
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   15 GFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            GF +R+   V   + +   +  D  + S L E ++ L+E L    DH+ YMR RE  H      T +R+   TF+EA VLV +S+ Q+ Y+++FFE +R L
Sbjct:  124 GFAIRV---VPPQRGIEGEAGPDDRLTSHLIELSEKLMEGLDTMTDHQEYMRERENRHAVLADSTFNRVKEWTFLEAIVLVLISFGQVLYLKKFFEQRRYL 221          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A4P9VYA0_9FUNG (Supernatant protein factor, C-terminal domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYA0_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 7.060e-8
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   44 LTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            L EE   + + +    D ++Y+  RE  HR+  + T+SR+ W +  E AVL+ V   Q+SY++RFFE KR++
Sbjct:  134 LQEEVRQMADGIRAIRDEQAYLMQREAMHRKTAESTNSRVAWWSLFETAVLIAVCIFQVSYLKRFFEVKRLV 205          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A4P9Y5D7_9FUNG (Putative COPII-coated vesicle protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y5D7_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 1.170e-6
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   44 LTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            L  E   L   L    D +SY+  RE  HR+  + T+SR+ W +F +  +L  V + Q+SY++RFFE KR++
Sbjct:  120 LANEIRQLTRHLQEVRDAQSYIVIRERMHRDTAESTNSRVKWWSFFQVILLATVCFFQISYLKRFFEVKRLV 191          
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Match: A0A177WE87_BATDL (GOLD domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WE87_BATDL)

HSP 1 Score: 54.3 bits (129), Expect = 2.170e-6
Identity = 26/94 (27.66%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   22 KDVDDLQSMADVSVEDKVMASFLTEEADLLVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 115
            K + D++      ++++ M  F T    +L++ +    D +S++  R+  HRE ++ T  R++W +F +  +++     Q+ Y+RRFFETKR++
Sbjct:  127 KIIRDMKKDNTKEIDEEQMDLFRT--LQILMDNIRFMRDEQSFLLKRQNRHRETIQSTHGRVLWWSFGQIVMVLIACGFQVLYLRRFFETKRVV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9222.20801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FIH8_ECTSI1.160e-7397.39Coated vesicle membrane protein n=1 Tax=Ectocarpus... [more]
A0A836CQY8_9STRA8.490e-1143.06Transmembrane emp24 domain-containing protein 2 n=... [more]
B8C202_THAPS4.940e-1037.27Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1CB01_9STRA1.450e-936.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1CB40_9STRA6.740e-936.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1TXQ7_9STRA1.330e-833.03Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1YMF7_9STRA2.260e-835.64Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A4P9VYA0_9FUNG7.060e-837.50Supernatant protein factor, C-terminal domain-cont... [more]
A0A4P9Y5D7_9FUNG1.170e-637.50Putative COPII-coated vesicle protein n=1 Tax=Pipt... [more]
A0A177WE87_BATDL2.170e-627.66GOLD domain-containing protein n=2 Tax=Batrachochy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 12..110
e-value: 3.4E-14
score: 53.2
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 12..110
NoneNo IPR availablePANTHERPTHR22811:SF31TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2coord: 12..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9222contigEcto-sp13_S_contig9222:1857..3932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9222.20801.1mRNA_Ecto-sp13_S_contig9222.20801.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9222 471..4630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9222.20801.1 ID=prot_Ecto-sp13_S_contig9222.20801.1|Name=mRNA_Ecto-sp13_S_contig9222.20801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MPSWYAKESGYKTFGFGLRLGKDVDDLQSMADVSVEDKVMASFLTEEADL
LVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWT
QLSYIRRFFETKRIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related