prot_Ecto-sp13_S_contig9206.20787.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9206.20787.1
Unique Name	prot_Ecto-sp13_S_contig9206.20787.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	755

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9206.20787.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 1032 bits (2668), Expect = 0.000e+0
Identity = 621/760 (81.71%), Postives = 632/760 (83.16%), Query Frame = 0

Query:    1 QVFLEGTPRGLRAAKALLPARVSGGCSGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPGTTPPDEAGFVRRRFTLGGADDMYVHGGGGWGGTSVDGLGXXXXGIRQGQRRSVSFGASSDESLCNGPAGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSTGVSADEIDAXXXXXXXXXXXXX--GGGISSRHGRGSGKAGGWAKAEQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTRAGQITKTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQVLEDINPTDDELRESQHRVRLPKREPTIGGGSRSGGXGVSTTSITT-AGVIGGWLGAAATVGLSTASAGLSTVTGVAGAXXXXXXXXXXXXXXXXXGRATAAAGGGASGAVKSEDGAVV-APLPAAGTAPPRGVEAALESAAAANCVQGEGQGGDVLRARGPVLCGAAPARNRGGYGGETVGGVGLASGQSPRSASPGLMGVISPAGVDAGDPVIGSGAAGARRGDDQLLRDVDVQQLTHPTGPSSNSSRRLTEGSWEMNLEAPPPDTKEHAAEPPLD-GGASETKSASGDSPTTKGSTAVGPGGDGPEAG 755
            QVFLEGTPRGLRAAKALLPARV GGC G NNNASAAWGDTFSPSMAGAGG PVSPALSSTP TTPPDEAGFVRRRFTLGGADDMY                                                                  EAYENYVSTSVSTSLTSIKGVLGAVKT+AKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLS GVSADEIDA   XXXXXXXXX   GGGISSRHGRG G+AGGWAKAEQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTRAGQI KTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQVLEDINPTDDELRESQHRVRLPKREPTIGG      X          AGVIGGWLGAAATVGLSTASAGLST+TGVAGAXXXXXXXXXXXXXXX  GRATAAAGGG     K EDGAV  AP PAAG  PPRGVEAA+ES +AA CVQGEGQ GDVLRA GPVLCGAAPARNRGGYGGETV GVGLASGQSPRSASPGL+GV SP GV+AGDPVIGSGAAGA RGDDQLLRDVD+Q LTH T PSS+SSR LTEGSWEMNLEAPPP+T+EHAAEPPLD GGASE KSA G    TKGSTAVGPGGDGPEAG
Sbjct:  354 QVFLEGTPRGLRAAKALLPARVPGGCGGKNNNASAAWGDTFSPSMAGAGGMPVSPALSSTPSTTPPDEAGFVRRRFTLGGADDMY------------------------------------------------------------------EAYENYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADEIDAPAAXXXXXXXXXEALGGGISSRHGRGGGRAGGWAKAEQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTRAGQIAKTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQVLEDINPTDDELRESQHRVRLPKREPTIGGXXXXXXXXXXXXXXXXXAGVIGGWLGAAATVGLSTASAGLSTLTGVAGAXXXXXXXXXXXXXXXVAGRATAAAGGGTG---KREDGAVAPAPAPAAGRGPPRGVEAAIESTSAAKCVQGEGQRGDVLRAGGPVLCGAAPARNRGGYGGETVRGVGLASGQSPRSASPGLIGVRSPTGVNAGDPVIGSGAAGATRGDDQLLRDVDIQ-LTHRTEPSSSSSRHLTEGSWEMNLEAPPPETREHAAEPPLDAGGASEAKSAGGKPSRTKGSTAVGPGGDGPEAG 1043

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BLAST of mRNA_Ecto-sp13_S_contig9206.20787.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 746 bits (1925), Expect = 7.880e-259
Identity = 406/447 (90.83%), Postives = 410/447 (91.72%), Query Frame = 0

Query:    1 QVFLEGTPRGLRAAKALLPARVSGGCSGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPGTTPPDEAGFVRRRFTLGGADDMYVHGGGGWGGTSVDGLGXXXXGIRQGQRRSVSFGASSDESLCNGPAGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSTGVSADEIDAXXXXXXXXXXXXXGGGISSRHGRGSGKAGGWAKAEQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTRAGQITKTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQ 447
            QVFLEGTPRGLRAAKALLPARV GGC GNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTP TTPPDE+GFVRRRFTLGGADDMY           VDG  XXXX IRQGQRRSVSFGASSDESLCNG AGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLS GVSADEIDA             GGGISSRHGRG G+ GGWAKAEQVLGQRME+LATAWLGAIDQEE DFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMT AHTRAGQI KTFKGEAKRFHECRRTEGVLAVLEL+RAQAHFAHKANAAWKQ
Sbjct:  338 QVFLEGTPRGLRAAKALLPARVPGGCGGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRRRFTLGGADDMYXXXXXXXXXXXVDGXXXXXXXIRQGQRRSVSFGASSDESLCNGAAGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADEIDAPAAAAAAGEGEELGGGISSRHGRGGGRGGGWAKAEQVLGQRMEKLATAWLGAIDQEECDFLDPLREQLGYLGSAKEVHRGRGRALDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTGAHTRAGQIAKTFKGEAKRFHECRRTEGVLAVLELSRAQAHFAHKANAAWKQ 784

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9206.20787.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9206.20787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KCW0_9PHAE	0.000e+0	81.71	PX domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D7FWD5_ECTSI	7.880e-259	90.83	PX domain-containing protein n=1 Tax=Ectocarpus si...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 351..371

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9206	contig	Ecto-sp13_S_contig9206:1..6431 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9206.20787.1	mRNA_Ecto-sp13_S_contig9206.20787.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9206 1..6431 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9206.20787.1 ID=prot_Ecto-sp13_S_contig9206.20787.1|Name=mRNA_Ecto-sp13_S_contig9206.20787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=755bp
QVFLEGTPRGLRAAKALLPARVSGGCSGNNNNASAAWGDTFSPSMAGAGG
TPVSPALSSTPGTTPPDEAGFVRRRFTLGGADDMYVHGGGGWGGTSVDGL
GGGGGGIRQGQRRSVSFGASSDESLCNGPAGGGQGPGWTGSALSVVANVG
YEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPL
YEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLE
DTDSLSTGVSADEIDALAAAAAAGEGEALGGGISSRHGRGSGKAGGWAKA
EQVLGQRMERLATAWLGAIDQEESDFLDPLREQLGYLGSAKEVHRGRGRA
LDALQAGNASLQRNKQRLHAARAQGDAHMASVSMGKMEAAEERMTCAHTR
AGQITKTFKGEAKRFHECRRTEGVLAVLELARAQAHFAHKANAAWKQVLE
DINPTDDELRESQHRVRLPKREPTIGGGSRSGGGGVSTTSITTAGVIGGW
LGAAATVGLSTASAGLSTVTGVAGATASAGLSTVTGVAGAVAGRATAAAG
GGASGAVKSEDGAVVAPLPAAGTAPPRGVEAALESAAAANCVQGEGQGGD
VLRARGPVLCGAAPARNRGGYGGETVGGVGLASGQSPRSASPGLMGVISP
AGVDAGDPVIGSGAAGARRGDDQLLRDVDVQQLTHPTGPSSNSSRRLTEG
SWEMNLEAPPPDTKEHAAEPPLDGGASETKSASGDSPTTKGSTAVGPGGD
GPEAG