prot_Ecto-sp13_S_contig9203.20785.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9203.20785.1
Unique Nameprot_Ecto-sp13_S_contig9203.20785.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length314
Homology
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Match: A0A6H5J832_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J832_9PHAE)

HSP 1 Score: 487 bits (1253), Expect = 2.150e-168
Identity = 277/313 (88.50%), Postives = 282/313 (90.10%), Query Frame = 0
Query:    1 MLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPPVEASGETGARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVALVLSVAWGATIRKVGAVARRGGGPLPSPPPSPSKQRGVPPVKLFAPQASRGAGXXXXXXXXXXXXXVRRRAVGGVEIDGSGGAKSAPAGKKDGVVRANGSDSSRSTSSASISSSIHRKDL 313
            MLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLP  EASGETGA AAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVA VLS+AWGATIRKV A+ARRGGGPLPSPPPSP+KQ G+PPVKLF PQASR  G             VRRRAVGGVEID SG A SA A K+DGVVRANGS SSRSTSSASI SS H KDL
Sbjct:  214 MLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPREEASGETGAGAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVAFVLSIAWGATIRKVEALARRGGGPLPSPPPSPTKQLGLPPVKLFTPQASRNGGRVGGVGCVDGTEGVRRRAVGGVEIDSSGSATSAAARKEDGVVRANGSGSSRSTSSASICSSSHEKDL 526          
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Match: A0A7S1YXC6_TRICV (ADP,ATP carrier protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXC6_TRICV)

HSP 1 Score: 59.7 bits (143), Expect = 2.790e-7
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 0
Query:   58 ARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVS--PGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLL 173
            A  A ++G  +A +  +SG+LQ +++P  M R +  L+ + +PV+      V  V   P  R   ++F   K+++YS+R  V E VY  +  D R LGKE I   G R G++   +LL
Sbjct:    1 ASRAAWMGQFYAAVNGLSGLLQFLILPLFMKRTDSRLVWRAMPVLPLLCAAVQCVQGDPSLRVVALSFFAAKVMDYSLRNVVNEQVYVPLDFDSRYLGKEIIGVFGNRFGKSGMSLLL 118          
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Match: A0A7S2Y4S8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4S8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.610e-7
Identity = 51/175 (29.14%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   11 LFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPPVEASGETGARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVS----PGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLG 181
            LF++ P+L AL  E    Q L   LN+ F   +   +P          + AG+VG  FA+I +++ +LQ  ++P  M  V P    + +P+ +   F + F S    P   T + +  V K+ EYS R  + E+V+  +  + R +GKE I   G R G++   + L   ++V+G
Sbjct:  303 LFKRVPVLGALFVEILASQGLATLLNVCFVARLGSAIPD-------DTKRAGWVGVFFALINVITMVLQFGILPAVMKVVEPRDAWRVIPLFSL--FTIIFQSFQKDPALFTVSASLLVMKVSEYSARRMLDEMVFVPLDFESRYVGKEVIGVFGYRFGKSLMSLALSGLTSVVG 468          
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Match: A0A7R9VC99_9STRA (ADP,ATP carrier protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC99_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.000e-6
Identity = 56/216 (25.93%), Postives = 98/216 (45.37%), Query Frame = 0
Query:    6 RSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPPVEASGETGARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVS-----PGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVALVLSVAWGATIRKVGAVARRGGG 216
            + +  LFR+ P+L AL  E    Q L   LN+ F   +++ +       +   RAA + G  ++ +   SG+LQ +++P  M   +PS + + +P+     F+ TF +     P       +F   K+++Y++R  V E++Y  +  D R  GKE I   G R G++   +LL   + + G    Q      A+  +  W  T R    +  R  G
Sbjct:  290 QEAVDLFRRVPILGALFWEVISFQSLSTILNVCFVTRLKEVVT------DDALRAA-WTGKFYSYVNGASGLLQFLILPLFMSYFDPSWVYRLMPLAP---FVCTFWTAFQDNPSLYLVAFSFFAAKVIDYTLRNVVNEMIYVPLDFDSRYKGKEIIGVFGSRFGKSGMSLLLSGLTYMFGSFGIQELARLTAVASTGWWACTYRLSNLIPNRSKG 495          
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Match: A0A6L8EXC7_9BACT (ADP,ATP carrier protein n=2 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A6L8EXC7_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 2.260e-6
Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 0
Query:   29 QVLVATLNLSFNEAIRQGLPPVEASGETGARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGR 166
            QV+   L+L FN  ++  LP  +A      R A F G  +  +GL++GILQLVV+P A+  V   ++  ++P+V      V  +SP  R+ T A+ + K L+YS+     EL Y  ++ D R   K+   + G R  +
Sbjct:  227 QVVSTVLDLRFNGLVQSELPDKDA------RTA-FFGAVYGNLGLIAGILQLVVVPLALRFVGLRVIHVSIPLVHLVSSFVLTISPSLRSGTAAYVIFKALDYSLFRASKELFYMPLSYDSRYRAKQINDSFGYRFAK 357          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9203.20785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J832_9PHAE2.150e-16888.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1YXC6_TRICV2.790e-733.05ADP,ATP carrier protein (Fragment) n=1 Tax=Trieres... [more]
A0A7S2Y4S8_9STRA4.610e-729.14Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7R9VC99_9STRA2.000e-625.93ADP,ATP carrier protein n=1 Tax=Pseudictyota dubia... [more]
A0A6L8EXC7_9BACT2.260e-632.61ADP,ATP carrier protein n=2 Tax=Candidatus Poribac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31187:SF1ADP,ATP CARRIER PROTEIN 1, CHLOROPLASTICcoord: 6..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
IPR004667ADP/ATP carrier proteinPANTHERPTHR31187FAMILY NOT NAMEDcoord: 6..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9203contigEcto-sp13_S_contig9203:977..5677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9203.20785.1mRNA_Ecto-sp13_S_contig9203.20785.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9203 2..6453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9203.20785.1 ID=prot_Ecto-sp13_S_contig9203.20785.1|Name=mRNA_Ecto-sp13_S_contig9203.20785.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPPV
EASGETGARAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLP
VVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDER
RLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVALVLSVAW
GATIRKVGAVARRGGGPLPSPPPSPSKQRGVPPVKLFAPQASRGAGGVGG
VGGVDGTEGVRRRAVGGVEIDGSGGAKSAPAGKKDGVVRANGSDSSRSTS
SASISSSIHRKDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004667ADP_ATP_car