prot_Ecto-sp13_S_contig920.20782.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig920.20782.1
Unique Nameprot_Ecto-sp13_S_contig920.20782.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig920.20782.1 vs. uniprot
Match: D8LFL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL4_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.160e-79
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0 
Query:    1 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLKIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESGHEADRWRHEINSLTKELDDLTSRWTPPSR 129
            MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLKIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESG++ADRWR EINSLTKELDDL SR TP  R
Sbjct:    1 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLKIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESGNDADRWRQEINSLTKELDDLMSRGTPSKR 129
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BLAST of mRNA_Ecto-sp13_S_contig920.20782.1 vs. uniprot
Match: A0A6H5JXR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR4_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 6.620e-71
Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 0 
Query:    1 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLKIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESGHEADRWRHEINSLTKELDDLTSRWTPPSR 129
            MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRL+IVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESGH+ADRWR EI+SLTKELDDLTS  TP  R
Sbjct: 2147 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLRIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESGHDADRWRQEISSLTKELDDLTSCGTPSKR 2275
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig920.20782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFL4_ECTSI1.160e-7994.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR4_9PHAE6.620e-7193.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig920contigEcto-sp13_S_contig920:10553..12143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig920.20782.1mRNA_Ecto-sp13_S_contig920.20782.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig920 10553..12143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig920.20782.1 ID=prot_Ecto-sp13_S_contig920.20782.1|Name=mRNA_Ecto-sp13_S_contig920.20782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLN
RLKIVYGAMPPHLTPEYVKTERFVKQLKNLIPALEQVLEATAEVSEVESG
HEADRWRHEINSLTKELDDLTSRWTPPSRRGGGAGGRSAGKVARANGGGS
SSSSSSSLGKRNGSSGGGRASSGGGGKSSKRRKSSEAAAGPGAGPGAGGR
PVKRSRSRR*
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