prot_Ecto-sp13_S_contig91990.20779.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91990.20779.1
Unique Nameprot_Ecto-sp13_S_contig91990.20779.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A6H5KYE3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYE3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.080e-17
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEV 40
            N NSLVVIKFFAPWCRSCKALDVKYRRMAVEN+DVKFVE+
Sbjct:   94 NINSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEI 133          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A835Z936_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z936_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.230e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEV 40
            N  SLVV K+FAPWCRSCKA+D+K++R+A+EN  V F E+
Sbjct:   35 NPESLVVFKWFAPWCRSCKAMDLKFKRLALENPCVVFAEI 74          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: Q68BL1_NANBA (Thioredoxin-like protein n=1 Tax=Nannochloris bacillaris TaxID=76111 RepID=Q68BL1_NANBA)

HSP 1 Score: 57.8 bits (138), Expect = 2.010e-8
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    3 NSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEVR-ERNVLYSRSLCVYIL 56
            + LVV+ FFAPWCR+CKAL  K++++ +EN +V+FV +  E N   +RSL V +L
Sbjct:   98 DQLVVVDFFAPWCRACKALFPKFKKLCIENPNVRFVGINFEENKGLARSLGVKVL 152          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD)

HSP 1 Score: 53.5 bits (127), Expect = 5.570e-7
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEV 40
            +S  LVVIKF+APWCRSCKA++ K +R+A E  ++ F EV
Sbjct:   98 SSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPEILFCEV 137          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A7S3YAB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB7_HETAK)

HSP 1 Score: 53.9 bits (128), Expect = 6.030e-7
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMA---VENEDVKFVE 39
            + N LVV+KF+APWCRSCKALDVK+R+ A       DV+F E
Sbjct:  106 SKNQLVVMKFYAPWCRSCKALDVKFRKWARGEYAARDVRFFE 147          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A836CK13_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK13_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.650e-7
Identity = 21/40 (52.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEV 40
            N + LVV K+ AP+CR+CKA+D+K+RR+A+E  DV F ++
Sbjct:   95 NPDKLVVFKWHAPYCRACKAMDLKFRRLALERRDVVFADI 134          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A8J2SJT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJT1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-6
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVE--NEDVKFVEVRERNV 45
            N+  LVVIKF+APWCR+C+ L+ KY+R+A+E  N+ V F E+  + +
Sbjct:   69 NTQDLVVIKFYAPWCRACRGLEPKYKRLAMEYSNKRVVFYEMSHKAI 115          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A7S2UVR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.460e-6
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    5 LVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEV 40
            LVV+KFFA WCRSCK LD +Y+++  ++ DV F E+
Sbjct:   94 LVVVKFFATWCRSCKQLDYQYKKLPAQHPDVMFCEI 129          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 5.210e-6
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    3 NSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEVR-ERNVLYSRSLCVYIL 56
            N +VVIKFFA WCR+CKA+  K+ R+A +  DV+F E+  + N    +SL + IL
Sbjct:   75 NRVVVIKFFASWCRACKAMSPKFTRIADDWPDVEFHEIMFDNNKKLCKSLGIKIL 129          
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Match: A0A432K0I2_9BACT (Thioredoxin n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A432K0I2_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 7.720e-6
Identity = 22/51 (43.14%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    1 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEVRERNVLYSRSL 51
            N N LV++++ A WC +C+    K++R+A ENE++KFV V       SRSL
Sbjct:   14 NENELVMVQYGATWCGNCRITKPKFKRLAGENENIKFVYVDAEKQPNSRSL 64          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91990.20779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KYE3_9PHAE3.080e-1792.50Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z936_9STRA1.230e-962.50Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
Q68BL1_NANBA2.010e-849.09Thioredoxin-like protein n=1 Tax=Nannochloris baci... [more]
A0A7S1TN71_9RHOD5.570e-757.50Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3YAB7_HETAK6.030e-759.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CK13_9STRA8.650e-752.50Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A8J2SJT1_9STRA1.110e-648.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UVR9_9STRA2.460e-655.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3ATR9_9EUKA5.210e-647.27Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A432K0I2_9BACT7.720e-643.14Thioredoxin n=3 Tax=Bacteroidetes TaxID=976 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..53
e-value: 3.7E-10
score: 41.7
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 2..40
e-value: 1.5E-8
score: 34.6
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91990contigEcto-sp13_S_contig91990:2..193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91990.20779.1mRNA_Ecto-sp13_S_contig91990.20779.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91990 2..193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91990.20779.1 ID=prot_Ecto-sp13_S_contig91990.20779.1|Name=mRNA_Ecto-sp13_S_contig91990.20779.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENEDVKFVEVRERNVLYSRS
LCVYILDADSTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf