prot_Ecto-sp13_S_contig9188.20767.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9188.20767.1
Unique Nameprot_Ecto-sp13_S_contig9188.20767.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9188.20767.1 vs. uniprot
Match: D8LMN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN6_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 1.040e-107
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0 
Query:   16 AYTLTRISNPLRAWARAKLELRNESDYRVSYWVVNEDKLTTAAVKRRVFRNIEDQLNDGGSDRTNAKHHNAKHGWDVINAEHALDDEYFIRRDYRPDAATAKKLRFPKGSRQLRVYAYAWFERQKEWRVFRDKVYDNGRGKRFRISATNQCVEPFEM 172
            A TLTRISNPLRAWARAKLELRNESDYRVSYWVVNEDKLTTAAVKRRVFRNIEDQLNDGGS RTNAKHHNAKHGWDVINAEHALDDEYF+RRDYRPDAATAKKLRFPKGSRQLRVYAYAWFE+QKEWRVFRDKV+DNGRGKRFRIS TNQCVEPFEM
Sbjct:   15 ACTLTRISNPLRAWARAKLELRNESDYRVSYWVVNEDKLTTAAVKRRVFRNIEDQLNDGGSYRTNAKHHNAKHGWDVINAEHALDDEYFLRRDYRPDAATAKKLRFPKGSRQLRVYAYAWFEKQKEWRVFRDKVFDNGRGKRFRISTTNQCVEPFEM 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9188.20767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMN6_ECTSI1.040e-10796.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9188contigEcto-sp13_S_contig9188:589..1568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9188.20767.1mRNA_Ecto-sp13_S_contig9188.20767.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9188 397..2999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9188.20767.1 ID=prot_Ecto-sp13_S_contig9188.20767.1|Name=mRNA_Ecto-sp13_S_contig9188.20767.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
MPSGSSPTWRNGSSQAYTLTRISNPLRAWARAKLELRNESDYRVSYWVVN
EDKLTTAAVKRRVFRNIEDQLNDGGSDRTNAKHHNAKHGWDVINAEHALD
DEYFIRRDYRPDAATAKKLRFPKGSRQLRVYAYAWFERQKEWRVFRDKVY
DNGRGKRFRISATNQCVEPFEM*
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