prot_Ecto-sp13_S_contig9176.20747.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9176.20747.1
Unique Nameprot_Ecto-sp13_S_contig9176.20747.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length674
Homology
BLAST of mRNA_Ecto-sp13_S_contig9176.20747.1 vs. uniprot
Match: D7G6H2_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H2_ECTSI)

HSP 1 Score: 1047 bits (2708), Expect = 0.000e+0
Identity = 577/674 (85.61%), Postives = 587/674 (87.09%), Query Frame = 0
Query:    1 RRGELSAVVRIRSPVNSSETTEPPDLCVRRDGPRHVSVEAPECRTTPRRKESFEVTRVLPLNATPEEIFAGVGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVGNGEPSRETPGESSQRAQSLPKGNSEPGGIGSRKRGKGRRRGDEEGLLKDILRDIFDKAAAVGPADAADPVLVACQEKQLSPTTGEPPYETLNPLVGSWSPSRQANDSPGFDVCPGGISTLLGTQELTPRGGGTATVQTNIPGIDYERWEGRRDSAEPVATADQICGSESRNETGKQLSRHSVTGEGGLRVVVALSAWEVAGKHVTDLFVDPSPDSGSTGDRSTGRKNSMGNCSSSIEVNDEGTRGVGARSXXXXXXXXXXXXXXXSSRGGGNRGXXXXXXXXXSGSDDSS-TGAGWPTGYPEGFLSVRAPNLSTALELVDAAQRRCSVCRRQTATATNEAAKGSRGKGXXXXXXXXXXXXXXXXXAGNRGHIFFRVVVYNTLEETASTLHVVDLAGGWEPPSEKPTGRRGSKCSGMGSVRPSGVSREWNSFDAMMVGLVPXXXXXXXATAVPPDRVNDSGCNCGRVENGGIACDADGATAAKPAAAASESRXXXXXPAHPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKGGGGAAWRTLDVARRATGISTTCIRLR 673
            RRGELSAVVRIRSP NSSETTEPPDLCVRRDGPRHVSVEAPECRTT R+KESFEVTRVL LNATPEEIFAGVG PVVDWLWDGFNAVVLSYGQARSGKTSLLVGNG P  ETPGESSQRAQSLPKGNSEPG IGS + GKGRRRGDEEGLLKDILRDIFDKAAA GPADAADPVLVACQEKQLSPTTGEPPYETLNPL GSWSPSR ANDSPGFDVCPGGI TLLGTQE+TP G GTATV T   GID ER EGRRDS EPVATADQI GSESRNETGKQ+SR S+TGE GLR VVALSAWEVAGKHVTDLFVDPSPDSGSTG  S GRKNSMGN SSSIEV+D+GTRGV  RS                SR GGNRG         SGSDDSS TGAGWPTGYPEGFLSVRAPNLSTALELVD AQ RCS CRRQ ATAT+EAAKGSRGKGXXXXXXXXXXXXXXXXX     H+FFRVVVYNTLEET STLH+VDLAGGWEPPSEKP GRRGSKCSGMGSVRPS VSREWNSFDAMMVGLVPXXXXXXXATAVPPDRVNDSGCNCG VE GGIA DA GATA    AAASESR     PAHPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGK GGGAAWR LDVARRATGISTTCIRLR
Sbjct:    8 RRGELSAVVRIRSPANSSETTEPPDLCVRRDGPRHVSVEAPECRTTSRQKESFEVTRVLQLNATPEEIFAGVGSPVVDWLWDGFNAVVLSYGQARSGKTSLLVGNGAPLTETPGESSQRAQSLPKGNSEPGRIGSGRLGKGRRRGDEEGLLKDILRDIFDKAAAAGPADAADPVLVACQEKQLSPTTGEPPYETLNPLAGSWSPSRHANDSPGFDVCPGGIGTLLGTQEVTPNGAGTATVHTKRYGIDSERSEGRRDSTEPVATADQIYGSESRNETGKQISRRSITGESGLRAVVALSAWEVAGKHVTDLFVDPSPDSGSTGGSSNGRKNSMGNSSSSIEVDDKGTRGVAGRSRSRNRSNRNRAAGSDCSRRGGNRGGGSRNSRGRSGSDDSSSTGAGWPTGYPEGFLSVRAPNLSTALELVDVAQSRCSACRRQRATATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETVSTLHIVDLAGGWEPPSEKPAGRRGSKCSGMGSVRPSAVSREWNSFDAMMVGLVPXXXXXXXATAVPPDRVNDSGCNCGHVEKGGIAFDAGGATAVNAEAAASESRPAPPPPAHPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKCGGGAAWRALDVARRATGISTTCIRLR 681          
BLAST of mRNA_Ecto-sp13_S_contig9176.20747.1 vs. uniprot
Match: A0A6H5L684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L684_9PHAE)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 561/693 (80.95%), Postives = 582/693 (83.98%), Query Frame = 0
Query:   20 TTEPPDLCVRRDGPRHVSVEAPECRTTPRRKESFEVTRVLPLNATPEEIFAG--------------------------------------VGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVGNGEPSRETPGESSQRAQSLPKGNSEPGGIGSRKRGKGRRRGDEEGLLKDILRDIFDKAAAVGPADAADPVLVACQEKQLSPTTGEPPYETLNPLVGSWSPSRQANDSPGFDVCPGGISTLLGTQELTPRGGGTATVQTNIPGIDYERWEGRRDSAEPVATADQICGSESRNETGKQLSRHSVTGEGGLRVVVALSAWEVAGKHVTDLFVDPSPDSGSTGDRSTGRKNSMGNCSSSIEVNDEGTRGVGARSXXXXXXXXXXXXXXXSSRGGGNRGXXXXXXXXXSGSDDSS-TGAGWPTGYPEGFLSVRAPNLSTALELVDAAQRRCSVCRRQTATATNEAAKGSRGKGXXXXXXXXXXXXXXXXXAGNRGHIFFRVVVYNTLEETASTLHVVDLAGGWEPPSEKPTGRRGSKCSGMGSVRPSGVSREWNSFDAMMVGLVPXXXXXXXATAVPPDRVNDSGCNCGRVENGGIACDADGATAAKPAAAASESRXXXXXPAHPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKGGGGAAWRTLDVARRATGISTTCIRLR 673
            TTEPPDLCV+RDGPRHVS+EAP+CRTTPR+KESFEVTRVLPLNATPEEIFAG                                      VGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVG G P  ETPGESSQRAQ    GNSEP GIGS + GKGRRRGD+EGLLKDILRDIFDKAAA GPADAADPVLVACQEKQLSPTTGEPPYE  NPL GSWSPSR ANDSPGFDVCPGGI TLLGTQELTPRGGGTATVQT + GID +RWEGRRDSA+PVATAD+I GSE  NETGKQ +R S+TGE G   VVALSAWEVAGKHVTDLFVDPSPDSGSTG  + GRK+SMGN SSSIEVND+GTRGVG RS  XXXXXXXX      SR GGNRGXXXXXXXXX  SDDSS TGAGWPTGYPEGFLSVRAPNLSTALELVDAAQ RCS CRRQ A AT+EAAKGSRGKGXXXXXXXXXXXXXXXXX     H+FFRVVVYNTLEETASTLH+VDLAGGWEPPSEKPTGRRGSKCSGMG+VRPS VSREWNSFDAMMVGLVPXXXXXXXATAVP +RVN S CNCG +E GGIACDAD ATA K AAAAS SR      AHPVFGSPKGKTFGGGGGGKLVE LRPLISGNTRTWLVVSVGGDGKGGGGAAWR LDVARRATGISTTCIRLR
Sbjct:    6 TTEPPDLCVQRDGPRHVSIEAPQCRTTPRQKESFEVTRVLPLNATPEEIFAGSDVRPLLLPTEVRFGVPMSLAPNPFTLTSKTNLKQKRGVGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVGKGAPLTETPGESSQRAQCFLNGNSEPVGIGSGRLGKGRRRGDKEGLLKDILRDIFDKAAAAGPADAADPVLVACQEKQLSPTTGEPPYEICNPLAGSWSPSRHANDSPGFDVCPGGIGTLLGTQELTPRGGGTATVQTKVSGIDSQRWEGRRDSAKPVATADRIYGSEIMNETGKQTTRPSLTGESGRIAVVALSAWEVAGKHVTDLFVDPSPDSGSTGGSNDGRKDSMGNSSSSIEVNDKGTRGVGGRSRSXXXXXXXXAAGSGCSREGGNRGXXXXXXXXXXXSDDSSSTGAGWPTGYPEGFLSVRAPNLSTALELVDAAQSRCSACRRQRAIATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETASTLHMVDLAGGWEPPSEKPTGRRGSKCSGMGTVRPSAVSREWNSFDAMMVGLVPXXXXXXXATAVPHNRVNGSDCNCGHIEKGGIACDADRATAVKAAAAASGSRPAPPPTAHPVFGSPKGKTFGGGGGGKLVETLRPLISGNTRTWLVVSVGGDGKGGGGAAWRALDVARRATGISTTCIRLR 698          
BLAST of mRNA_Ecto-sp13_S_contig9176.20747.1 vs. uniprot
Match: A0A1Y1HRJ0_KLENI (Hypothetical kinesin-like protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRJ0_KLENI)

HSP 1 Score: 60.1 bits (144), Expect = 1.500e-5
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   45 TTPRRKESFEVTRVLPLNATPEEIFAGVGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVG 104
            +TPR   +F  T+  P  A+     A VG P++DWLWDGFNA++L YGQ  +GK+  L G
Sbjct:   88 STPR---TFSCTQAFPPGASQLGFCAQVGAPIIDWLWDGFNALLLGYGQTGTGKSHSLFG 144          
BLAST of mRNA_Ecto-sp13_S_contig9176.20747.1 vs. uniprot
Match: A0A7R9TK55_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TK55_MICPS)

HSP 1 Score: 52.8 bits (125), Expect = 7.450e-5
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   10 RIRSPVNSSETTEPPDLCVRRDGPRHVSVEAPECRTTPRRKESFEVTRVLPLNATPEEIFAGVGGPVVDWLWDGFNAVVLSYGQARSGKT-SLLVGNGE 107
            RIR P  S+ T        +RD  R V+V  P    + RR+  F V +V    AT E+++ GVG P++D +  G +  +L+YGQ+ SGKT S+L  +G+
Sbjct:   19 RIRPPQASTLTAA---ATTKRDD-RRVTVSNPTAAISSRRE--FRVDKVFDATATNEDVYLGVGAPILDAVLAGCHGSILAYGQSGSGKTYSMLNDDGD 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9176.20747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6H2_ECTSI0.000e+085.61Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L684_9PHAE0.000e+080.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1HRJ0_KLENI1.500e-546.67Hypothetical kinesin-like protein n=1 Tax=Klebsorm... [more]
A0A7R9TK55_MICPS7.450e-537.37Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036961Kinesin motor domain superfamilyGENE3D3.40.850.10coord: 4..129
e-value: 1.0E-13
score: 52.9
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 14..314
e-value: 1.5E-9
score: 37.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9176contigEcto-sp13_S_contig9176:3300..6147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9176.20747.1mRNA_Ecto-sp13_S_contig9176.20747.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9176 3300..6147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9176.20747.1 ID=prot_Ecto-sp13_S_contig9176.20747.1|Name=mRNA_Ecto-sp13_S_contig9176.20747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=674bp
RRGELSAVVRIRSPVNSSETTEPPDLCVRRDGPRHVSVEAPECRTTPRRK
ESFEVTRVLPLNATPEEIFAGVGGPVVDWLWDGFNAVVLSYGQARSGKTS
LLVGNGEPSRETPGESSQRAQSLPKGNSEPGGIGSRKRGKGRRRGDEEGL
LKDILRDIFDKAAAVGPADAADPVLVACQEKQLSPTTGEPPYETLNPLVG
SWSPSRQANDSPGFDVCPGGISTLLGTQELTPRGGGTATVQTNIPGIDYE
RWEGRRDSAEPVATADQICGSESRNETGKQLSRHSVTGEGGLRVVVALSA
WEVAGKHVTDLFVDPSPDSGSTGDRSTGRKNSMGNCSSSIEVNDEGTRGV
GARSRSRNRSNRNRAAGSGSSRGGGNRGGDRRNSRGRSGSDDSSTGAGWP
TGYPEGFLSVRAPNLSTALELVDAAQRRCSVCRRQTATATNEAAKGSRGK
GGGGGKAGGTTGAESAAAAGNRGHIFFRVVVYNTLEETASTLHVVDLAGG
WEPPSEKPTGRRGSKCSGMGSVRPSGVSREWNSFDAMMVGLVPPPPPPPP
ATAVPPDRVNDSGCNCGRVENGGIACDADGATAAKPAAAASESRPAPPPP
AHPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKGGGG
AAWRTLDVARRATGISTTCIRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036961Kinesin_motor_dom_sf
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase