prot_Ecto-sp13_S_contig917.20742.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig917.20742.1
Unique Nameprot_Ecto-sp13_S_contig917.20742.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp13_S_contig917.20742.1 vs. uniprot
Match: D8LCH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH6_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.160e-56
Identity = 108/117 (92.31%), Postives = 115/117 (98.29%), Query Frame = 0 
Query:    1 HTQLEEGRKRWRSRLERLQEECSEERKAVREEVSRLSERAEGAEAAARRAAGVREDESAGLRASLSAELAQVEAKVAAVLSRKTEQADALKERLSSLQGQTKAREEELSDHRRRTFS 117
            +T+LEEGR+RWRSRLERLQEECSEERKAVRE+VSRL+ERAEGAEAAARRAAGVRED+SAGLRASLSAE AQVEAKVAAVL RKTEQADALKERL+SLQGQTKAREEELSDHRRRTFS
Sbjct:    5 YTKLEEGRERWRSRLERLQEECSEERKAVREQVSRLTERAEGAEAAARRAAGVREDKSAGLRASLSAEFAQVEAKVAAVLGRKTEQADALKERLTSLQGQTKAREEELSDHRRRTFS 121
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BLAST of mRNA_Ecto-sp13_S_contig917.20742.1 vs. uniprot
Match: A0A6H5JCC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC7_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 5.030e-56
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 0 
Query:    1 HTQLEEGRKRWRSRLERLQEECSEERKAVREEVSRLSERAEGAEAAARRAAGVREDESAGLRASLSAELAQVEAKVAAVLSRKTEQADALKERLSSLQGQTKAREEELSDHRRRTFS 117
            H QLEEGR+RWRSRL+RLQEECSEERKA +EEVSRLSERAEGAEAAARRAAG REDESAGLRASLSAE AQVE KVAAVLSRKTEQA+ALKERLSSLQGQTKAREEELSDHRRRTFS
Sbjct:   18 HAQLEEGRERWRSRLKRLQEECSEERKAAKEEVSRLSERAEGAEAAARRAAGFREDESAGLRASLSAEFAQVEGKVAAVLSRKTEQANALKERLSSLQGQTKAREEELSDHRRRTFS 134
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig917.20742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCH6_ECTSI1.160e-5692.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCC7_9PHAE5.030e-5692.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..107
NoneNo IPR availableCOILSCoilCoilcoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig917contigEcto-sp13_S_contig917:16039..17316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig917.20742.1mRNA_Ecto-sp13_S_contig917.20742.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig917 15970..17316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig917.20742.1 ID=prot_Ecto-sp13_S_contig917.20742.1|Name=mRNA_Ecto-sp13_S_contig917.20742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
HTQLEEGRKRWRSRLERLQEECSEERKAVREEVSRLSERAEGAEAAARRA
AGVREDESAGLRASLSAELAQVEAKVAAVLSRKTEQADALKERLSSLQGQ
TKAREEELSDHRRRTFS*
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