prot_Ecto-sp13_S_contig91390.20706.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91390.20706.1
Unique Nameprot_Ecto-sp13_S_contig91390.20706.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig91390.20706.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.590e-38
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 
Query:    8 SQLPTVLRLWLDVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQAR 80
            SQLPTVLRLWL+VAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAA PGETRDNRELIKQAR
Sbjct: 1307 SQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAAGPGETRDNRELIKQAR 1379
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BLAST of mRNA_Ecto-sp13_S_contig91390.20706.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.230e-37
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    8 SQLPTVLRLWLDVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ 78
            SQLPTVLRLWL+VAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ
Sbjct: 1303 SQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ 1373
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BLAST of mRNA_Ecto-sp13_S_contig91390.20706.1 vs. uniprot
Match: A0A098VQT2_9MICR (TFIIS N-terminal domain-containing protein n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VQT2_9MICR)

HSP 1 Score: 60.1 bits (144), Expect = 1.030e-8
Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:    8 SQLPTVLRLWLDVAPDGGPFLPPPQ-RASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNREL 75
            +++   +RLWL+  PDG   LP    R S+L +L  LP++K HL+ESG+GK+V+ +   P ETR+N++L
Sbjct:  144 NRILDAIRLWLEPYPDGS--LPSIDVRKSILHILAQLPIEKIHLKESGLGKVVMYLYKSPDETRENKKL 210
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BLAST of mRNA_Ecto-sp13_S_contig91390.20706.1 vs. uniprot
Match: A0A1Y1WJ92_9FUNG (TFIIS N-terminal domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WJ92_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 5.950e-5
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0 
Query:   14 LRLWLDVAPDGGPFLPPPQ-RASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ 78
            LRLWL+   DG   LP    + +LL +L  LP+++ HLRESGIGK+++ M+  P     NR + +Q
Sbjct:  187 LRLWLEPLDDGS--LPALDIQNALLDILGKLPIRRDHLRESGIGKIIMFMSKCPRIPERNRRVCEQ 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91390.20706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6K9_9PHAE6.590e-3897.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVY3_ECTSI1.230e-3798.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A098VQT2_9MICR1.030e-843.48TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A1Y1WJ92_9FUNG5.950e-542.42TFIIS N-terminal domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 7..82
e-value: 3.8E-12
score: 48.1
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 36..77
e-value: 9.1E-5
score: 22.4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.775

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91390contigEcto-sp13_S_contig91390:6..266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91390.20706.1mRNA_Ecto-sp13_S_contig91390.20706.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91390 6..266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91390.20706.1 ID=prot_Ecto-sp13_S_contig91390.20706.1|Name=mRNA_Ecto-sp13_S_contig91390.20706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
WWWWWWLSQLPTVLRLWLDVAPDGGPFLPPPQRASLLKVLMVLPVQKSHL
RESGIGKLVVAMAADPGETRDNRELIKQARSKDQHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N