prot_Ecto-sp13_S_contig9138.20705.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9138.20705.1
Unique Name	prot_Ecto-sp13_S_contig9138.20705.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	869

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9138.20705.1 vs. uniprot
Match: A0A6H5KU86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU86_9PHAE)

HSP 1 Score: 889 bits (2296), Expect = 1.930e-309
Identity = 703/875 (80.34%), Postives = 717/875 (81.94%), Query Frame = 0

Query:   19 NDQHWEQLKQAQHQPHPQHHPAAASWSGGVNTLADVGGRTNSLAIAHNQHQ--LQQAPYVQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPYPTAAAATAASWAANRVPAPPPADNRATNQYPAGRSVSYSPPLRATAPPAGGAADGPAHRPLRVVDXXXXXXXXXXXXSGGSG--RPTSRGTYPASGNSLSGFAQQPNAGGXXXXXXXXXXX-----------GSKNAGGKQQEESRGKAPAARETARVSSGIWRGRGXXXXXXXXXXXXXXXXXGSLDLSNLRTSMPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIEEGEAGEEVTAAAKPSAVARGEDRESAFSDRRSENAERSPERGTACAAXXXXXDEEIEEGEWCWQEKTEGSPRSEQPGAATEVGAAXXXXXGDRRSPSGGGRANGDRSSSTWDGSRGGSPTRPSSISGKRGREQSSLSPPRGPAKYTARSGRDPRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGQDWRQERQPPSLALPSPAAQAATTAPGTSPSXXXXXXXXXXXXXXXXXXXXXXXXGGVSFVSLPAASPATPPRPLLSLPHPPHGPPRLMYAVPXXXXXXXXXL--------QFVVQPGMTVTVPATTLGAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPSTAVPLSLPMPMAPAAXXXXXXXXXXXXXXXXXPRKPRRGGLKKPSQGGGG-GLKLTVRVSDAEPSAQEAPVFSSDDDDDEKPGRVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTPPRRLSPPPEALPDDREWPEYPKTMTR 869
            NDQ WEQ+KQAQHQPHPQ HPAAASWSGGVNTLA VGGRTNSLAIAHNQHQ  LQQAPYVQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXX            SWAANRVPAPPPADNRATNQ+PAGR+VSYSPPLRA APPAGGA DG AHRP     XXXXXXXXXXXX       RPTSRGTYPA GNSLSGFAQQPN   XXXXXXXXXXX           G+KNAGGKQQEES GKAPAARETARVSSGIWRGRGXXXXXXXXXXXXXXXXX  LDLSNLRTSMPGR XXXXXXXXXXXXX                  XXXXXXXXXX               IEEGEAGEEV AAAKPSAVARGE+R +A +DRRSENAERSPERGTA A  XXX DEEIEEGEWCWQEKTEGSP+SEQPGAA  VG  XXXXX  RRSPSGGGRANG+RSSSTWDGSRGGSPTRP S SGKRGREQSSLSPPRGPAKYTARSGRDPRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGQDWRQER+PPSLALPSPAAQAA TAPGTSPSXXXX         XXXXXXXXXXX  VSFVSLPAASPA PPRPLLSLPHPPHGPPRLMYAV   XXXXXXX         QFV+QPGMTVTVP TTLGA                      XXXXVAPSTAVPLSLPMPMAPAA    X  XXXXXXXXXX RKPRRGGLKKPSQG    GLKLTVRVSDAEPSAQEAPVFSSDD+DD+KPGRVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTPPRRLSPPPEALPD+REWPEYPKTMTR
Sbjct:   19 NDQRWEQVKQAQHQPHPQQHPAAASWSGGVNTLASVGGRTNSLAIAHNQHQHQLQQAPYVQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAANRVPAPPPADNRATNQHPAGRNVSYSPPLRAVAPPAGGATDGSAHRPXXXXXXXXXXXXXXXXXXXXXXXXRPTSRGTYPACGNSLSGFAQQPNGXXXXXXXXXXXXXXXXXXXXXXLTGAKNAGGKQQEESHGKAPAARETARVSSGIWRGRGXXXXXXXXXXXXXXXXXXXLDLSNLRTSMPGRXXXXXXXXXXXXXXVAGRATALNSIEAEKSGSXXXXXXXXXX---------------IEEGEAGEEVAAAAKPSAVARGEERAAALNDRRSENAERSPERGTASATAXXXADEEIEEGEWCWQEKTEGSPKSEQPGAAAGVGXXXXXXX--RRSPSGGGRANGNRSSSTWDGSRGGSPTRPPSTSGKRGREQSSLSPPRGPAKYTARSGRDPRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGQDWRQERRPPSLALPSPAAQAAATAPGTSPSXXXXQQLQPSYGAXXXXXXXXXXXXXVSFVSLPAASPAPPPRPLLSLPHPPHGPPRLMYAVLPPXXXXXXXXPQPXXXXPQFVIQPGMTVTVPGTTLGAAAGPIMLRPPAPLLFTPPPVTAXXXXVAPSTAVPLSLPMPMAPAAPPRPXTFXXXXXXXXXXXRKPRRGGLKKPSQGXXXXGLKLTVRVSDAEPSAQEAPVFSSDDEDDDKPGRVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTPPRRLSPPPEALPDEREWPEYPKTMTR 876

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BLAST of mRNA_Ecto-sp13_S_contig9138.20705.1 vs. uniprot
Match: D8LD31_ECTSI (Ankyrin repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD31_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.670e-72
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0

Query:  748 LKLTVRVSDAEPSAQEAPVFSSDDDDDEKPGRVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTPPRRLSPPPEALPDDREWPEYPKTMTR 869
            LKLTVRVSDAEPSAQEAPVFSSDDDDD KPG VSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAG+RDCVEGAVNNTPPRRLSPPPEALPD+REWPEYPKTMTR
Sbjct:   45 LKLTVRVSDAEPSAQEAPVFSSDDDDD-KPGGVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGNRDCVEGAVNNTPPRRLSPPPEALPDEREWPEYPKTMTR 165

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9138.20705.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9138.20705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KU86_9PHAE	1.930e-309	80.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LD31_ECTSI	1.670e-72	96.72	Ankyrin repeat-containing protein, putative n=1 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 618..639 score: 31.82 coord: 587..599 score: 38.46 coord: 554..570 score: 23.53 coord: 675..692 score: 36.67 coord: 704..729 score: 40.77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9138	contig	Ecto-sp13_S_contig9138:3464..6070 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9138.20705.1	mRNA_Ecto-sp13_S_contig9138.20705.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9138 3438..6070 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9138.20705.1 ID=prot_Ecto-sp13_S_contig9138.20705.1|Name=mRNA_Ecto-sp13_S_contig9138.20705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=869bp
MQQQHFFSGGGAAATSGGNDQHWEQLKQAQHQPHPQHHPAAASWSGGVNT
LADVGGRTNSLAIAHNQHQLQQAPYVQQHQQQQQQQRTPPPPHPVYDSSR
HSSNGAAEPYPTAAAATAASWAANRVPAPPPADNRATNQYPAGRSVSYSP
PLRATAPPAGGAADGPAHRPLRVVDDDRGGGGGGGGDSGGSGRPTSRGTY
PASGNSLSGFAQQPNAGGGGGGSGSGSLSGSKNAGGKQQEESRGKAPAAR
ETARVSSGIWRGRGGGRFRGRGFGVGRGAGRGSLDLSNLRTSMPGRGGGG
GGGGSSAAAGGGAAGAAAGRAAALNSKEAEKSGSSSSSGSSSRSSSSSSK
NEEIEEGEAGEEVTAAAKPSAVARGEDRESAFSDRRSENAERSPERGTAC
AAAAAADDEEIEEGEWCWQEKTEGSPRSEQPGAATEVGAAAAAAAGDRRS
PSGGGRANGDRSSSTWDGSRGGSPTRPSSISGKRGREQSSLSPPRGPAKY
TARSGRDPRGFRGAASAATAESTRRPDRGGDGSATSPQSPSSAGQDWRQE
RQPPSLALPSPAAQAATTAPGTSPSSPPQQQLQSSYGAPPTRAPPPPAAG
GVSFVSLPAASPATPPRPLLSLPHPPHGPPRLMYAVPPPPRQQQQQLQFV
VQPGMTVTVPATTLGAAAGPIMLRPPPPPLFTPPPVTAAAAAVAPSTAVP
LSLPMPMAPAAPPRPPTFVPPPAPAAAAPRKPRRGGLKKPSQGGGGGLKL
TVRVSDAEPSAQEAPVFSSDDDDDEKPGRVSRRDTRGEWPHEFKFRPQLG
GSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTPPRRLSPP
PEALPDDREWPEYPKTMTR