prot_Ecto-sp13_S_contig912.20681.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig912.20681.1
Unique Nameprot_Ecto-sp13_S_contig912.20681.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: W7TNU3_9STRA (Rho gtpase-activating protein 39 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNU3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.960e-19
Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLA-----LPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLI 120
            D  VVADLLK WLR +REPLVP   Y RA+ AG         Q + +   LA     LP  N+ATL +L  F +  A+  + N+M  + LA+V SPNLLR+P  DP++  +NA  E  FV  L+
Sbjct:  901 DPMVVADLLKAWLRHLREPLVPLQHYRRALDAG---------QAQDLAPTLAFLDTVLPKANAATLVYLIHFLNHCAELSQFNQMTPRNLAIVFSPNLLRHPSNDPMLMVQNAENERKFVIQLM 1015          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: I2CS72_NANGC (Rho-GAP domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS72_NANGC)

HSP 1 Score: 84.3 bits (207), Expect = 9.240e-19
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    5 VVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLA-----LPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNA 109
            VVADLLK WLR +REPLVP   Y RA+ AG         Q + +   LA     LP  N+ATL +L  F +  A+  + N+M  + LA+V SPNLLR+P  DP++  +NA
Sbjct:    2 VVADLLKAWLRHLREPLVPLQHYRRALDAG---------QAQDLAPTLAFLDTVLPKANAATLVYLIHFLNHCAELSQFNQMTPRNLAIVFSPNLLRHPSNDPMLMVQNA 102          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A7S1XYP8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYP8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.290e-16
Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 0
Query:    1 MDVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLI 120
            M   + ADLLK  LRSM+EP++P   Y+R +A G   +G  A   E+  +M  L   N ATL  +  F ++++      +M    LA+VL+PNLL+NP  DPL+F  N+  E  FV  LI
Sbjct:   33 MTPLIPADLLKQLLRSMKEPIIPYSVYDRCLAIGR--KGDSAA--EAAALMGELRPANRATLYTVISFLAELSKAHDVTQMGVDNLALVLAPNLLKNPSDDPLLFAANSGDERGFVGQLI 148          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A7R9YEW3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEW3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.330e-16
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 0
Query:    7 ADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLIEGSKQ 125
            ADLLK WLR +  PL+    Y+ A+ A    + + A++     V   LP  + ATL FL  F  ++A   + N M++  +A+V++PN+LRNP  D L+F +NA+ E  F+  LI+   Q
Sbjct:  473 ADLLKYWLRKLEPPLIDYPFYDEAIGAARAGDLEGAKE-----VFNKLPPAHRATLRFLCTFLREIAKMREVNMMDSHNIALVIAPNILRNPSNDALLFARNADYEKRFLILLIDACDQ 586          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A7S2R8N6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8N6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.470e-15
Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLIEGS 123
            DV V A+L+K++LRS++EPL+P   Y+ A+ +G  ++   A     + V+  LP  N  TL       +++A  E  N+M+    A+V +PN+LR P  DP++  +N  +E  FV  L+  S
Sbjct:  876 DVNVAANLIKIFLRSLKEPLIPADLYDEALRSGGENDPAVA-----LEVVRKLPEANVRTLRHCVALMAELASYESVNKMSMDNTAMVFAPNILRIPTNDPMLLARNQESEKRFVLHLVSAS 992          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A3P7NDH8_9BILA (Uncharacterized protein n=2 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A3P7NDH8_9BILA)

HSP 1 Score: 76.3 bits (186), Expect = 5.830e-14
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQE--KTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLI 120
            D +V A LLK+WLRS+ EPL+P   Y R +A  + D+      EE+ R++  LP  N   L  L      +A++E  K  +M+   LA+V++PN+LR    DP V   NA  E  F+K+LI
Sbjct:  188 DAHVPAALLKLWLRSLPEPLLPDAFYSRCLA--VCDQ-----PEEACRIVELLPAVNRLVLAKLLELLQLLAEEETVKCTKMDVCNLAMVMAPNVLRCGSDDPRVIFDNARREMTFLKTLI 301          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A183E3V2_9BILA (Uncharacterized protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183E3V2_9BILA)

HSP 1 Score: 76.3 bits (186), Expect = 1.140e-13
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQE--KTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLI 120
            D +V A LLK+WLRS+ EPL+P   Y R +A  + D+      EE+ R++  LP  N   L  L      +A++E  K  +M+   LA+V++PN+LR    DP V   NA  E  F+K+LI
Sbjct:  420 DAHVPAALLKLWLRSLPEPLLPDAFYSRCLA--VCDQ-----PEEACRIVELLPAVNRLVLAKLLELLQLLAEEETVKCTKMDVCNLAMVMAPNVLRCGSDDPRVIFDNARREMTFLKTLI 533          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: V5GTH8_ANOGL (Rho GTPase-activating protein 21 (Fragment) n=10 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GTH8_ANOGL)

HSP 1 Score: 75.1 bits (183), Expect = 3.090e-13
Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKN-ANAEANFVKSLIEGS 123
            D++VV+ LLK + R M E LV    Y   + A  +++ K  R EE  R++ +LP  N  TL +L     +VAD  K N+M AK LA+V  P ++R PEG+ +    N  N +   ++SLI  +
Sbjct:  230 DLHVVSSLLKSYFRKMPESLVTDQLYPNFIKADKIEDPK-LRMEELKRLVRSLPKHNYHTLKYLIMHLKRVADNSKVNKMEAKNLAIVFGPTIVR-PEGENMENMVNHMNNQCKIIESLISNA 350          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: V5GPN2_ANOGL (Rho GTPase-activating protein 21 (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GPN2_ANOGL)

HSP 1 Score: 75.1 bits (183), Expect = 3.090e-13
Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKN-ANAEANFVKSLIEGS 123
            D++VV+ LLK + R M E LV    Y   + A  +++ K  R EE  R++ +LP  N  TL +L     +VAD  K N+M AK LA+V  P ++R PEG+ +    N  N +   ++SLI  +
Sbjct:  242 DLHVVSSLLKSYFRKMPESLVTDQLYPNFIKADKIEDPK-LRMEELKRLVRSLPKHNYHTLKYLIMHLKRVADNSKVNKMEAKNLAIVFGPTIVR-PEGENMENMVNHMNNQCKIIESLISNA 362          
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Match: A0A0N5CVR8_THECL (Uncharacterized protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5CVR8_THECL)

HSP 1 Score: 73.2 bits (178), Expect = 1.410e-12
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    2 DVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRVMLALPLPNSATLDFLARFFSKVADQE--KTNRMNAKGLAVVLSPNLLRNPEGDPLVFKKNANAEANFVKSLI 120
            D +V A LLK WLRS+ EPL+P   Y+R++   LV +    + EE+ R++  LP  N   L  L      +A++E  K  +M+   LA+V++PN+LR    DP +  +NA  E  F+K+LI
Sbjct:  542 DAHVPAALLKSWLRSLPEPLLPDTFYQRSL---LVCD----QPEEACRIVELLPSVNRLVLAKLLELLQLLAEEETVKCTKMDVCNLAMVMAPNVLRCVSDDPRIIFENARREMAFLKTLI 655          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig912.20681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TNU3_9STRA1.960e-1943.55Rho gtpase-activating protein 39 n=2 Tax=Monodopsi... [more]
I2CS72_NANGC9.240e-1944.55Rho-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S1XYP8_9STRA1.290e-1640.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YEW3_9STRA4.330e-1636.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2R8N6_9STRA7.470e-1534.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3P7NDH8_9BILA5.830e-1438.84Uncharacterized protein n=2 Tax=Gongylonema pulchr... [more]
A0A183E3V2_9BILA1.140e-1338.84Uncharacterized protein n=1 Tax=Gongylonema pulchr... [more]
V5GTH8_ANOGL3.090e-1336.59Rho GTPase-activating protein 21 (Fragment) n=10 T... [more]
V5GPN2_ANOGL3.090e-1336.59Rho GTPase-activating protein 21 (Fragment) n=1 Ta... [more]
A0A0N5CVR8_THECL1.410e-1238.02Uncharacterized protein n=1 Tax=Thelazia callipaed... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 1..124
e-value: 2.6E-5
score: 21.4
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 2..99
e-value: 4.3E-23
score: 81.8
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..125
score: 26.023
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 1..125
e-value: 7.2E-30
score: 105.9
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 2..122
NoneNo IPR availablePANTHERPTHR45876FAMILY NOT NAMEDcoord: 2..122
NoneNo IPR availablePANTHERPTHR45876:SF8FI04035Pcoord: 2..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig912contigEcto-sp13_S_contig912:9580..13275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig912.20681.1mRNA_Ecto-sp13_S_contig912.20681.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig912 9385..13322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig912.20681.1 ID=prot_Ecto-sp13_S_contig912.20681.1|Name=mRNA_Ecto-sp13_S_contig912.20681.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
MDVYVVADLLKMWLRSMREPLVPPGSYERAVAAGLVDEGKEARQEESMRV
MLALPLPNSATLDFLARFFSKVADQEKTNRMNAKGLAVVLSPNLLRNPEG
DPLVFKKNANAEANFVKSLIEGSKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot