prot_Ecto-sp13_S_contig9119.20675.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9119.20675.1
Unique Nameprot_Ecto-sp13_S_contig9119.20675.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9119.20675.1 vs. uniprot
Match: D8LEH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH0_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.490e-8
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   39 MEGRATAAPVGLVDSGSGNAQRLLKKENARLQALVSELRAASPSVARLT 87
            MEGRA AAP+GLVDSGSGN QRLLKKENARLQ +      A  + +R T
Sbjct:    1 MEGRAAAAPLGLVDSGSGNVQRLLKKENARLQVIRLRSATAPDNASRTT 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9119.20675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEH0_ECTSI2.490e-865.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9119contigEcto-sp13_S_contig9119:1934..3358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9119.20675.1mRNA_Ecto-sp13_S_contig9119.20675.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9119 1934..3358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9119.20675.1 ID=prot_Ecto-sp13_S_contig9119.20675.1|Name=mRNA_Ecto-sp13_S_contig9119.20675.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
CAFVSCGRNPGGYLSVMVQALRQTSRAPTAHGGAAADKMEGRATAAPVGL
VDSGSGNAQRLLKKENARLQALVSELRAASPSVARLT
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