prot_Ecto-sp13_S_contig91.20656.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91.20656.1
Unique Nameprot_Ecto-sp13_S_contig91.20656.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length483
Homology
BLAST of mRNA_Ecto-sp13_S_contig91.20656.1 vs. uniprot
Match: A0A6H5L7U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U5_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 1.550e-126
Identity = 240/482 (49.79%), Postives = 264/482 (54.77%), Query Frame = 0
Query:    1 MKIFQALMLATVAVLHVDADTCTDNWTATCSDDSTSANATGDDCTGTSAACTEDDCCLCPDGYTDSDADAATVTCVIDDTKCLSHTCADGVQIQDAATTDXXXXXXXXXXXXXXXXXSAANACGDNQDCATEADNTATCTCTDGYIDDNADGDAATVVCELDDTKCLSHTCTVDGEIHISAAATTDCADSXXXXXXXXXXXXXXXDDVCGDNQDCAVADDDTASCTCMDGYVDDGDDNAATLTCELDDTKCLSHTCTADGAVQIQDAATTDCADSGCTDADCCEGRWRAPCLAQGVLRSLSCLLRPTHTWEALIVNRVYTTDHARGILDALKLHSRGDDSGDEDTCSTEAAACEANSACAACMTAGDAYMEDGTCVVESEPETCQDFADMYCCNAGGEDGEDECRTDSLMLAYANCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTSSFFSRSSPGAAVFGAIATGVAGFLFTAAEGLL 482
            MKIF+ALMLA VAVL V+ADTC+DNW +                TGT+ ACTEDDCCLCPDGY DSD   A VTC I++                                                                                   DT CLSH CTV  E+ I  AATT C +          XXXXXX    G+NQDC   +D+TA+CTC DGY DD +D      C+L+DT CLSH CT    VQIQDAATT C +  CTD  CCE                                                     D  GD D CSTE AACEAN+ACAAC+TAGDAYMEDG+CVVESEPETCQDFADMYCC AGG DGEDECRT+SL+LAY NCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTSSFFSRSSPGAAVFGA+ATG+ GFLFTAAEGLL
Sbjct:    1 MKIFEALMLAAVAVLQVNADTCSDNWASPXXXXXXXXXXXXXXXTGTANACTEDDCCLCPDGYIDSDTATANVTCAIEEV----------------------------------------------------------------------------------DTMCLSHNCTVTNEVQIQDAATTLCTNGTCTDEQCCEXXXXXXXXXXGENQDCTTQNDNTAACTCTDGYNDDNEDGV----CDLNDTMCLSHNCTVTNEVQIQDAATTLCTNGTCTDEQCCEA---------------------------------------------------DDGGGDVDVCSTEKAACEANTACAACITAGDAYMEDGSCVVESEPETCQDFADMYCCYAGGVDGEDECRTNSLILAYTNCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTSSFFSRSSPGAAVFGAVATGIVGFLFTAAEGLL 345          
BLAST of mRNA_Ecto-sp13_S_contig91.20656.1 vs. uniprot
Match: D8LMC6_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC6_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 1.750e-105
Identity = 257/542 (47.42%), Postives = 277/542 (51.11%), Query Frame = 0
Query:    1 MKIFQALMLATVAVLHVDADTCTDNWTATCSDDSTSANATGDDCTGTSAACTEDDCCLCPDGYTDSDADAATVTCVIDDTKCLSHTCA--DGVQIQDAATTDXXXXXXXXXXXXXXXXXSAANACGDNQDCATEADNTATC---------------------------------------------------------TCTDGYIDDNADGDAATVVCELDDTKCLSHTCTVDGEIHISAAATTDCADSXXXXXXXXXXXXXXXDDVCGDNQDCAVADDDTASCTCMDGYVDDG-DDNAATLTCELDDTKCLSHTCTADGAVQIQDAATTDCADSGCTDADCCEGRWRAPCLAQGVLRSLSCLLRPTHTWEALIVNRVYTTDHARGILDALKLHSRGDDSGDEDTCSTEAAACEANSACAACMTAGDAYMEDGTCVVESEPETCQDFADMYCCNAGGEDGEDECRTDSLMLAYANCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTSSFFSRSSPGAAVFGAIATGVAGFLFTAAEGLL 482
            MKIFQAL+LA VAVL VDA+TC  +W+ATCSD +T+   T DDCTGT+AACTEDDCC                      TKCLSHTC   D VQIQDAATT             XXXXX+ A  C        EAD                                                              TC DGYIDDNADGDAATVVC+LD                  AAATTDCA+  XXXXXXXXXXXXX DDVCGDNQD                YVDD  D +AAT+ CE+D                                                                                         GDD  DED C TE AACEAN+ACAACMTAGDAYMED TCVVESE ETCQD+ADMYCC AGGEDGEDECRT+SLMLAY NC++EE EVESCTLIDLCD SATVAPTPAPVTSGTSSFFSRSSPG AVFGA+ATG+AGFLFTA EGLL
Sbjct:   12 MKIFQALVLAGVAVLQVDAETCNADWSATCSDATTTVATTTDDCTGTAAACTEDDCCY---------------------TKCLSHTCTVTDEVQIQDAATT-----------ACXXXXXTDAQCC--------EADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCMDGYIDDNADGDAATVVCDLD------------------AAATTDCAEGGXXXXXXXXXXXXXVDDVCGDNQDXXXXXXXXXXXXXXXXYVDDNADGDAATVVCEMD-----------------------------------------------------------------------------------------GDD--DEDICPTEMAACEANTACAACMTAGDAYMEDETCVVESELETCQDYADMYCCYAGGEDGEDECRTNSLMLAYTNCMVEEYEVESCTLIDLCDASATVAPTPAPVTSGTSSFFSRSSPGTAVFGAVATGIAGFLFTAVEGLL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91.20656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7U5_9PHAE1.550e-12649.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMC6_ECTSI1.750e-10547.42EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 116..160
e-value: 8.1
score: 15.4
coord: 29..76
e-value: 43.0
score: 8.7
coord: 202..245
e-value: 0.26
score: 20.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 459..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..458
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 479..482
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.739

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91contigEcto-sp13_S_contig91:31948..38517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91.20656.1mRNA_Ecto-sp13_S_contig91.20656.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91 30459..38538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91.20656.1 ID=prot_Ecto-sp13_S_contig91.20656.1|Name=mRNA_Ecto-sp13_S_contig91.20656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MKIFQALMLATVAVLHVDADTCTDNWTATCSDDSTSANATGDDCTGTSAA
CTEDDCCLCPDGYTDSDADAATVTCVIDDTKCLSHTCADGVQIQDAATTD
CADSGCADAECCEAEACSAANACGDNQDCATEADNTATCTCTDGYIDDNA
DGDAATVVCELDDTKCLSHTCTVDGEIHISAAATTDCADSGCADADCCMA
DPCAVDDVCGDNQDCAVADDDTASCTCMDGYVDDGDDNAATLTCELDDTK
CLSHTCTADGAVQIQDAATTDCADSGCTDADCCEGRWRAPCLAQGVLRSL
SCLLRPTHTWEALIVNRVYTTDHARGILDALKLHSRGDDSGDEDTCSTEA
AACEANSACAACMTAGDAYMEDGTCVVESEPETCQDFADMYCCNAGGEDG
EDECRTDSLMLAYANCLIEENEVESCTLIDLCDTSATVAPTPAPVTSGTS
SFFSRSSPGAAVFGAIATGVAGFLFTAAEGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom