prot_Ecto-sp13_S_contig908.20635.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig908.20635.1
Unique Nameprot_Ecto-sp13_S_contig908.20635.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length224
Homology
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BLAST of mRNA_Ecto-sp13_S_contig908.20635.1 vs. uniprot
Match: A0A6H5K2Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z8_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 7.360e-112
Identity = 185/218 (84.86%), Postives = 198/218 (90.83%), Query Frame = 0 
Query:   10 VKSILCSSAPREANHE----SNSINHADIPRRKGNKPSHSGSGSRSHGNERAASGRTFAGVLRALLKPSSSPANASAGSGDEGXXXEAPPAGRSGVAGGWQPRTALDLSGHSFSKALKAEINLSKEKKMALKTSRTKSMNDLGSSSNISGNPAVKDSWWEKQESDDSWFSRVSSTSTIPASPPELHQQHQQQQRKPGPVCHARSYGNLDEMSLAVGLQ 223
             +SILCSSAPREA+HE    SNSI+ ADIPRRKGNKPSH+GS SRSH NERAASG+TFAGVLRALLKPSSSPA+ASAGSGDEG   EAPP GRSGVAGGWQPRTALDLSGHSFSKALKAEIN SKEKKMALK S+T+SMN+LGSSS  S N AVKDSWWEKQES++SWFSRVSSTSTIPASPPELHQQHQQQ RKPGP CHARS+G+LDEMSLAVGLQ
Sbjct:    8 TQSILCSSAPREADHELQHASNSIDRADIPRRKGNKPSHTGSSSRSHENERAASGKTFAGVLRALLKPSSSPADASAGSGDEGDG-EAPPVGRSGVAGGWQPRTALDLSGHSFSKALKAEINRSKEKKMALKKSKTRSMNNLGSSS--SSNLAVKDSWWEKQESEESWFSRVSSTSTIPASPPELHQQHQQQ-RKPGPGCHARSFGDLDEMSLAVGLQ 221
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BLAST of mRNA_Ecto-sp13_S_contig908.20635.1 vs. uniprot
Match: D8LRG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG6_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.910e-70
Identity = 143/220 (65.00%), Postives = 150/220 (68.18%), Query Frame = 0 
Query:   10 VKSILCSSAPREANHESNSINHADIPRRKGNKPSHSGSGSRS----HGNERAASGRTFAGVLRALLKPSSSPANASAGSGDEGXXXEAPPAGRSGVAGGWQPRTALDLSGHSFSKALKAEINLSKEKKMALKTSRTKSMNDLGSSSNISGNPAVKDSWWEKQESDDSWFSRVSSTSTIPASPPELHQQHQQQQ--RKPGPVCHARSYGNLDEMSLAVGLQ 223
             +SILCSSA  EANHESNSINHADIPRRKGNKP HSGS        HGN+RAASGRTFAGVLRALLK SSSPA+ASAGSGDEG   EAPP GRSGVAGGWQPRTALDLSGHSFSKALKAEIN SKEKKMALKTSRT+SMN+LGS                                                   RK GPVCHARS+G+LDEMSLAVGLQ
Sbjct:    8 TQSILCSSAL-EANHESNSINHADIPRRKGNKPGHSGSXXXXXXXXHGNDRAASGRTFAGVLRALLKTSSSPADASAGSGDEGEEGEAPPVGRSGVAGGWQPRTALDLSGHSFSKALKAEINRSKEKKMALKTSRTRSMNNLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAGPVCHARSFGDLDEMSLAVGLQ 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig908.20635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2Z8_9PHAE7.360e-11284.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRG6_ECTSI1.910e-7065.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig908contigEcto-sp13_S_contig908:604..2961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig908.20635.1mRNA_Ecto-sp13_S_contig908.20635.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig908 191..3044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig908.20635.1 ID=prot_Ecto-sp13_S_contig908.20635.1|Name=mRNA_Ecto-sp13_S_contig908.20635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MQGLCLNQRVKSILCSSAPREANHESNSINHADIPRRKGNKPSHSGSGSR
SHGNERAASGRTFAGVLRALLKPSSSPANASAGSGDEGEEGEAPPAGRSG
VAGGWQPRTALDLSGHSFSKALKAEINLSKEKKMALKTSRTKSMNDLGSS
SNISGNPAVKDSWWEKQESDDSWFSRVSSTSTIPASPPELHQQHQQQQRK
PGPVCHARSYGNLDEMSLAVGLQ*
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