prot_Ecto-sp13_S_contig9059.20613.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9059.20613.1
Unique Nameprot_Ecto-sp13_S_contig9059.20613.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length339
Homology
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: D7FZ74_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ74_ECTSI)

HSP 1 Score: 597 bits (1538), Expect = 2.880e-211
Identity = 317/355 (89.30%), Postives = 323/355 (90.99%), Query Frame = 0
Query:    1 MGNRRIEHEGRCEAEGCQGGGEQVPELAGGDHKAVHHQGLLGGRRGRHQDNDGLSPLGWKPPKPLARGRATKEAETLEHPPDHEDKTGDDAAVAVDGIETPPLVPASAQQSVDIEEIDVDEEEWXXXXXXXXXX--------------------ETASPDPIIPSFTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            MGNRRIE+EG  +AEGCQGGGEQVPELAGGDHKAVH+QGLLG RRGRHQDNDGLSPL WKPPKPLARG ATKEAETLEH PDHE+KTGDDAAVAVDGIETPPLVPA A Q VD+EEIDVDEEEW XXXXXXXXX                    ETASPDP IPSFTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLP+PPLDQLVDKLGGPNAVAEMTGRQDRMVKA DGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ
Sbjct:  104 MGNRRIEYEGCGKAEGCQGGGEQVPELAGGDHKAVHYQGLLGRRRGRHQDNDGLSPLDWKPPKPLARGGATKEAETLEHSPDHEEKTGDDAAVAVDGIETPPLVPAPAHQVVDVEEIDVDEEEWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETASPDPTIPSFTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPHPPLDQLVDKLGGPNAVAEMTGRQDRMVKADDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 458          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: D7G328_ECTSI (OSJNBa0085I10.3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G328_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 4.630e-113
Identity = 176/230 (76.52%), Postives = 181/230 (78.70%), Query Frame = 0
Query:   44 RRGRHQDNDGLSPLGWKPPKPLARGRATKEAETLEHPPDHEDKTGDDAAVAVDGIETPPLVPASAQQSVDIEEIDVDEEEWXXXXXXXXXXETASPDPIIPSFTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRR 273
            +R + +DNDGLSPLGWKPPKPLARG ATKEAETLEHPPDHE+K GDDAAVAVDGIETPP                                           FTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLP+PPLDQLVDKLGGPNAV EMTGRQDRMVKA DGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRR
Sbjct:   54 KRAKTEDNDGLSPLGWKPPKPLARGGATKEAETLEHPPDHEEKNGDDAAVAVDGIETPP-------------------------------------------FTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPHPPLDQLVDKLGGPNAVVEMTGRQDRMVKADDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRR 240          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: A0A8J2WWD9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWD9_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.760e-51
Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 0
Query:  169 LHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRT-RPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            + A+ D+I  + LP   LD L+D LGG N +AEM+GR +R+V+ Y G+ Y +KR   N   + EQN FER EF  G KLVAIISDAAS+G+SLHA +  R +N RRR+HITLELPWSADK +QQ+GR+HRANQ   P Y+L+VS + GE RF AAV KRL+SLGALTQ
Sbjct:  674 IKAFSDKIDALKLPGNALDMLIDDLGGFNKIAEMSGRSERLVRNYKGEFYTQKRSEANQVSMHEQNLFEREEFQSGEKLVAIISDAASSGISLHAEQNARVKNRRRRVHITLELPWSADKTLQQMGRSHRANQASAPEYKLLVSPLGGERRFCAAVVKRLQSLGALTQ 841          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: A0A7S3JSV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSV4_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.010e-49
Identity = 101/164 (61.59%), Postives = 123/164 (75.00%), Query Frame = 0
Query:  173 LDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHA-NRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            + +I  + LP   LD L+D+LGG +AVAEMTGR  RMV+ Y  +  L+KR  N  +  +EQN +ER EF  GRKLVAIISDAAS+G+SLHA N  R +N RRR+H TLELPWSADK IQQ+GR+HR+NQ  PP Y+L+VS + GE RF AAV KRLESLGALTQ
Sbjct:  691 MKKIDALQLPGNALDMLIDELGGIDAVAEMTGRTSRMVRNYKDEFVLQKRTENGVSA-NEQNLYEREEFQAGRKLVAIISDAASSGISLHAENNDRVKNKRRRVHFTLELPWSADKTIQQMGRSHRSNQLVPPQYKLLVSPLGGERRFVAAVTKRLESLGALTQ 853          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.800e-49
Identity = 102/177 (57.63%), Postives = 131/177 (74.01%), Query Frame = 0
Query:  159 ETKFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            + ++D+A  R    L     M LP  PLDQLV++LGG   VAEMTGR+ RMVK  DG+V  EKR+AN  + +  QN FE+  F  G+KLVAIIS+AASAG+SL A+R R +N + R+HIT+ELPWSADKA+QQLGR+HR+NQ   P Y+L++S V GE RF++AV+ RLESLGALTQ
Sbjct:   92 QQRYDVAVERQGRLLAAAKAMQLPGNPLDQLVNELGGAGVVAEMTGRKGRMVKKPDGEVVYEKRNANGIS-MTMQNVFEKECFMSGQKLVAIISEAASAGISLQADR-RAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQ 266          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: UPI001F5DA456 (protein FORGETTER 1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DA456)

HSP 1 Score: 180 bits (457), Expect = 3.130e-48
Identity = 96/193 (49.74%), Postives = 132/193 (68.39%), Query Frame = 0
Query:  143 IPSFTEEEDTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            +  + +E D  + G  + ++D A  R    LD I  + LPN PLD ++D+LGGP+ VAE+TGR+  +++A DGK  + +        +D  N  E+  F +G K VAIIS+A SAGVSLHA+R R +N RRR+HITLELPWSAD+A QQ GRTHR+NQ   P+Y+++ + + GE RF++ VAKRLESLGALTQ
Sbjct:   50 LECYFKERDAYITGLSK-RYDTAVERKSMILDIIRALDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNTKEIALDMINMHEKQLFMDGEKFVAIISEAGSAGVSLHADR-RVKNQRRRVHITLELPWSADRATQQFGRTHRSNQTSAPVYRILFTNLGGEKRFASIVAKRLESLGALTQ 240          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: A0A446LE42_TRITD (PHD-type domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LE42_TRITD)

HSP 1 Score: 177 bits (448), Expect = 4.640e-48
Identity = 94/176 (53.41%), Postives = 130/176 (73.86%), Query Frame = 0
Query:  161 KFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGK-VYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            ++D A  R    LD I  + LPN PLD ++D+LGGP+ VAE+TGR+  +++A DGK +  + R+A   + ++  N  E+ +F + +KL+AIIS+A SAGVSLHA+R R +N RRR+H+TLELPWSAD+AIQQ GRTHR+NQ   P Y+L+ + + GE RF++ VAKRLESLGALTQ
Sbjct:   66 RYDSAVERKLKILDVIRSLDLPNNPLDDIIDQLGGPDKVAEITGRRGMLIRASDGKGIIYQARNAKEVS-MEMINMHEKQQFMDDKKLIAIISEAGSAGVSLHADR-RAKNQRRRVHVTLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQ 239          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: A0A0P0XD70_ORYSJ (Os08g0223833 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0XD70_ORYSJ)

HSP 1 Score: 177 bits (450), Expect = 6.940e-48
Identity = 96/174 (55.17%), Postives = 123/174 (70.69%), Query Frame = 0
Query:  162 FDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            +D A  R    L  I  + LPN PLD ++D+LGGP  VAE+TGR+  +V+A DGK  + +        +D  N  E+ +F +G KLVAIIS+A SAGVSLHA+R R +N RRR+HITLELPWSAD+AIQQ GRTHR+NQ   P Y+L+ + + GE RF++ VAKRLESLGALTQ
Sbjct:   59 YDTAVERKSNILQIIRSLDLPNNPLDDIIDQLGGPYNVAEITGRRGMLVRASDGKGVVYQTRNKKEVALDMINIHEKQQFMDGEKLVAIISEAGSAGVSLHADR-RAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQNSAPEYRLLFTNLGGEKRFASIVAKRLESLGALTQ 231          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: I1PPK7_ORYGL (PHD-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PPK7_ORYGL)

HSP 1 Score: 179 bits (455), Expect = 8.910e-48
Identity = 95/176 (53.98%), Postives = 131/176 (74.43%), Query Frame = 0
Query:  161 KFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVKAYDGK-VYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQ 335
            ++D A  +    LD I  + LPN PLD ++D+LGGP+ VAE+TGR+  +++A DGK V  + R+A   + ++  N  E+ +F +G+KL++IIS+A SAGVSLHA+R R +N RRR+HITLELPWSAD+AIQQ GRTHR+NQ   P Y+L+ + + GE RF++ VAKRLESLGALTQ
Sbjct:   95 RYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVS-MEMINMHEKQQFMDGKKLISIISEAGSAGVSLHADR-RAKNQRRRVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQ 268          
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Match: A7RYE6_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RYE6_NEMVE)

HSP 1 Score: 173 bits (438), Expect = 1.040e-47
Identity = 98/182 (53.85%), Postives = 131/182 (71.98%), Query Frame = 0
Query:  158 GETKFDL----AKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVAEMTGRQDRMVK-AYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAIISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALT 334
            GE K D     AKS L  ++ +I+   LP  PLD L+DK+GGP+ VAEMTGR+ R+V+ A D + + E R+++ ++ +D  N  ER  F  G KLVAIISDAAS G+SLHA+  R  N RRR+H+T+ELPWSADKA+QQLGR+HR+NQ   PIY+L+ + + GE RF+AAVA+RL+SLG  T
Sbjct:  163 GEAKEDTWAVTAKSLLLGFVKKIN---LPISPLDDLIDKMGGPDCVAEMTGRRGRVVRTAQDREPHYEARESD-SSHVDSLNIQERNSFMSGSKLVAIISDAASTGISLHAD-LRAANQRRRVHVTIELPWSADKAVQQLGRSHRSNQSSGPIYKLVTTNLGGERRFAAAVARRLQSLGTYT 339          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9059.20613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ74_ECTSI2.880e-21189.30Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
D7G328_ECTSI4.630e-11376.52OSJNBa0085I10.3 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A8J2WWD9_9STRA4.760e-5158.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JSV4_9STRA1.010e-4961.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D8LN05_ECTSI2.800e-4957.63PHD-type domain-containing protein (Fragment) n=1 ... [more]
UPI001F5DA4563.130e-4849.74protein FORGETTER 1-like n=1 Tax=Lolium rigidum Ta... [more]
A0A446LE42_TRITD4.640e-4853.41PHD-type domain-containing protein n=2 Tax=Triticu... [more]
A0A0P0XD70_ORYSJ6.940e-4855.17Os08g0223833 protein n=1 Tax=Oryza sativa subsp. j... [more]
I1PPK7_ORYGL8.910e-4853.98PHD-type domain-containing protein n=1 Tax=Oryza g... [more]
A7RYE6_NEMVE1.040e-4753.85Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 198..325
e-value: 3.1E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR12706:SF30coord: 143..335
IPR026937Strawberry notch, helicase C domainPFAMPF13871Helicase_C_4coord: 185..335
e-value: 4.0E-67
score: 226.8
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 143..335
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 239..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9059contigEcto-sp13_S_contig9059:514..6250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9059.20613.1mRNA_Ecto-sp13_S_contig9059.20613.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9059 487..6250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9059.20613.1 ID=prot_Ecto-sp13_S_contig9059.20613.1|Name=mRNA_Ecto-sp13_S_contig9059.20613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp
MGNRRIEHEGRCEAEGCQGGGEQVPELAGGDHKAVHHQGLLGGRRGRHQD
NDGLSPLGWKPPKPLARGRATKEAETLEHPPDHEDKTGDDAAVAVDGIET
PPLVPASAQQSVDIEEIDVDEEEWAAAGGGGGGGETASPDPIIPSFTEEE
DTLLWGQGETKFDLAKSRLHAWLDRIHYMVLPNPPLDQLVDKLGGPNAVA
EMTGRQDRMVKAYDGKVYLEKRDANNTAGIDEQNNFERAEFNEGRKLVAI
ISDAASAGVSLHANRTRPENPRRRLHITLELPWSADKAIQQLGRTHRANQ
FQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQVRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026937SBNO_Helicase_C_dom
IPR026741SNO
IPR027417P-loop_NTPase