prot_Ecto-sp13_S_contig9043.20599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9043.20599.1
Unique Nameprot_Ecto-sp13_S_contig9043.20599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 1.720e-209
Identity = 293/301 (97.34%), Postives = 298/301 (99.00%), Query Frame = 0
Query:    4 GTKLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMAYQSEARVVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTLYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGSDDADTEAIMATADPGDYGDRIMIAMNVEITETGDSTDRAAAVRDAGAKV 304
            GT LFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTD SYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEI AYQSEARVVFNTGQAADEQYFSFSPPAEVLG+ENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGT+YVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLG+DDADTEAIMATADPGDYGDRIM+AMNVEITETG+STDRAAAVRDAGAKV
Sbjct:    4 GTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKV 304          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: D8LFB3_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB3_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.620e-16
Identity = 57/195 (29.23%), Postives = 97/195 (49.74%), Query Frame = 0
Query:  125 VVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLGVPET-SDISTPPQNMLLLHSAT-----ELAEKPELIQPFVDKAYCKGWGTLYVTDDLFDEG-----NPWDNPPTFWTAFIEASRNIPTVE--SCGDGGLKIIAPLLGSDDADTEAIMATADPGDYGDRIMIAMNVEI-TETGDSTDRAAA-VRDAGAKV 304
            V FN G   D  YF+FS    V+ +EN+++ ++ +G+P T S +  P Q+ L +H+ +        E   L++  V +A C GWG +Y+T D  D G     NPW+    +W   +EA +  PT+   SC    + ++ P+  + +A  +A+          + +   + V +    GD T+  A  +RDAGA+V
Sbjct:  179 VTFNPGGGVDPAYFAFSGNPTVMSYENFYRVMKNVGMPRTPSSVLDPSQHALAVHTTSPDLDGNTEETRALVEAIVQEAACSGWGKIYLTSDSQDPGSDDGGNPWNVLTNYWDTLVEAVKAYPTLPPPSCSGPEMALMVPVWLAGEALEDAVDDVLGVVTKSNFLEGGVTVVLDARDGDGTNPTATQLRDAGARV 373          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A517XLQ9_9BACT (Spherulation-specific family 4 n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XLQ9_9BACT)

HSP 1 Score: 73.2 bits (178), Expect = 2.310e-11
Identity = 62/221 (28.05%), Postives = 91/221 (41.18%), Query Frame = 0
Query:   48 DPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSV-------------------------EEEIMAY----------QSEARVVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKG--WGTLYVTDDLFDEGNPWDNPPTFWTAFIEA 231
            D +W  LA+ A  G  +  I+NPASGPG+VTD +Y  VID V+ AG   + YV+T+Y  +    V                           E+ AY            +  ++ N G   D  YF    P  V   EN   + R+   P  +    P +   L+H+       P+   P  + A  +G  +G ++VTD      NPWD  PT+W   + A
Sbjct:   41 DARWQQLADAAKNGVPLTVIVNPASGPGKVTDPNYTAVIDGVQKAGVTTVGYVSTSYARRPAADVLADVKTWLKLYPTTQGIFLDEQPSGAAEVAAYLELCESIRRLNPKLTILSNPGTVCDAGYFGTGGPDVVCVHENE-GSFRKYARPAKA--YPPGRTAGLVHTT------PQGANPAAEVALARGHGFGMVFVTDARMP--NPWDRLPTYWDDLLTA 250          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A1I2K2G6_9ACTN (Spherulation-specific family 4 n=9 Tax=Streptomyces TaxID=1883 RepID=A0A1I2K2G6_9ACTN)

HSP 1 Score: 59.7 bits (143), Expect = 9.890e-7
Identity = 53/184 (28.80%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGFENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTLYVT 208
            M  +IPLY+ P  D G        W  L   AA   T   ++NPA+GPG   D ++      ++ AGA++L YV T YG ++T  V E+++ ++            AD  +     S PAE+       ++VR+LG   T+ +  P      +H A   A   +L   F      +G  T YV+
Sbjct:    1 MSLLIPLYVHPAEDPG-------AWHQLVTAAA--RTYAVVINPANGPGPSPDPAFTAAAGALRAAGARLLGYVDTDYGARSTAEVAEDVVRHRE--------WYGADGCFLDRVTSDPAELRACRRLVRSVRRLGA--TTVVLNPG-----VHPAPGYARVADLTVTF------EGHWTTYVS 154          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: UPI001F46EA5D (spherulation-specific family 4 protein n=1 Tax=Streptomyces glomeratus TaxID=284452 RepID=UPI001F46EA5D)

HSP 1 Score: 56.6 bits (135), Expect = 7.940e-6
Identity = 42/136 (30.88%), Postives = 63/136 (46.32%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGFENYFKAVRQLG 160
            M  ++PLY+ P  D G        W  L   A    T   +LNPASGPG   D ++  V   ++ AGA++L YV T YGN+    + E++  +Q           AAD  +     + PA +       ++VR+LG
Sbjct:    1 MTLLVPLYVHPAEDPG-------AWHRLIRAAT--RTYAIVLNPASGPGTGPDRAFTAVAGALRAAGARLLGYVDTDYGNRDRAEIAEDLRRHQR--------WYAADGCFLDRVTAAPAGLPACRRLVRSVRRLG 119          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A533ULB9_9ARCH (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A533ULB9_9ARCH)

HSP 1 Score: 57.8 bits (138), Expect = 9.980e-6
Identity = 54/213 (25.35%), Postives = 86/213 (40.38%), Query Frame = 0
Query:   55 AETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMAYQSEARVVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLG--VPETSDISTPPQNMLLLHSAT----ELAEKPELIQPFVDKAYCKGWGT--------------------------------LYVTDDLFDEGNPWDNPPTFWTAFI 229
            A+ A     +  I+NP+SGP    D++Y   I  ++ AG K+L YV T+YG ++T S+E +I +Y +   V    G   DE        A  +GFE Y+  +      +  T  +  P  + L  +  T    ++ E P L  P +      GW T                                +Y+TDD     NP+D  P++  A +
Sbjct:    3 AKNAYPSVPIVAIINPSSGPSSSIDSNYVSGIQQLQAAGVKVLGYVYTSYGTRSTSSIESDINSYNNWYHV---NGIFFDEM-------ANKVGFETYYSNLSSYAKSLSMTMTVGNPGTDTLSSYIGTVDILDIYENPSL--PALTSL--TGWHTSYPKSNFGFIGFGVSSLPNQSIITADSSYVAYMYITDDTLP--NPYDTVPSYLNAEV 199          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A2K8PQ96_STRLA (Spherulation-specific family 4 n=1 Tax=Streptomyces lavendulae subsp. lavendulae TaxID=58340 RepID=A0A2K8PQ96_STRLA)

HSP 1 Score: 55.1 bits (131), Expect = 2.670e-5
Identity = 33/94 (35.11%), Postives = 45/94 (47.87%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMAYQ 120
            M  ++PLY+ P  D G        W  L   A    T   +LNPASGPG   D ++      +  AGA++L YV T YG +    V  EI+ Y+
Sbjct:    1 MTLLVPLYVHPAEDPG-------AWARLIGAAP--RTYAVVLNPASGPGPRPDPAFTAAASALHAAGARLLAYVDTAYGQRDAAEVNYEILRYR 85          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A069K0T2_9ACTN (Uncharacterized protein n=11 Tax=Streptomyces TaxID=1883 RepID=A0A069K0T2_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 3.570e-5
Identity = 43/140 (30.71%), Postives = 61/140 (43.57%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEIMA----YQSEARVVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLGVP 162
            M  ++PLY+ P  D G        W  L   AA   T   +LNPASGPG   D +Y      ++ AGA +L YV T YG +    V +E+      YQ++   +  T   A          AE+       + +R+ GVP
Sbjct:    1 MSLLVPLYVHPAEDPG-------AWHRLI--AAARRTYAVVLNPASGPGTAPDPAYVSAAAALRSAGAHVLGYVDTDYGERPPSEVADEVAKHRDWYQADGCFLDRTPSGA----------AELPTCRRLVRRIRRSGVP 121          
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Match: A0A518HBN0_9BACT (Spherulation-specific family 4 n=1 Tax=Tautonia plasticadhaerens TaxID=2527974 RepID=A0A518HBN0_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 9.610e-5
Identity = 61/241 (25.31%), Postives = 93/241 (38.59%), Query Frame = 0
Query:   27 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDTSYPDVI-DYVKGAGAKMLCYVATTYGNKTTGSVEEEIM---------------AYQSEAR--------------------VVFNTGQAADEQYFSFSPPAEVLGFENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTLYVTDDLFDEGNPWDNPPTFWTAFIEA 231
            ++ ++P Y  P         +D  W  L  T+A    +  ++NPASGPGE+ +  Y D++      AG  M+ YV T +  +    +E +I                A  SE +                    VV N G A  E YF        + FEN      +  +P       PP     +  A + AE  E     + +A  KG G L+VTD +    NPW + P +W   ++A
Sbjct:  209 LKILVPAYFFPAASG-----LD-DWKRLL-TSARRVPIVAVVNPASGPGELPNRDYADIVRGGTATAGLTMIGYVNTAFATRPRPEIEADIDRWVRFYPEIQGIFLDAQSSEGQNEDFYADLSDYVRRSIDGAIVVTNPGTACAEGYFESGAADIAIVFENSH-GFDEFELPLWR-FRYPPGRFAAVPYAVKTAEAME---DAIRQAGEKGIGYLFVTDGVMP--NPWRSLPPYWAELVDA 435          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9043.20599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G9D4_ECTSI1.720e-20997.34Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D8LFB3_ECTSI1.620e-1629.23Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A517XLQ9_9BACT2.310e-1128.05Spherulation-specific family 4 n=1 Tax=Urbifossiel... [more]
A0A1I2K2G6_9ACTN9.890e-728.80Spherulation-specific family 4 n=9 Tax=Streptomyce... [more]
UPI001F46EA5D7.940e-630.88spherulation-specific family 4 protein n=1 Tax=Str... [more]
A0A533ULB9_9ARCH9.980e-625.35Fibronectin type-III domain-containing protein (Fr... [more]
A0A2K8PQ96_STRLA2.670e-535.11Spherulation-specific family 4 n=1 Tax=Streptomyce... [more]
A0A069K0T2_9ACTN3.570e-530.71Uncharacterized protein n=11 Tax=Streptomyces TaxI... [more]
A0A518HBN0_9BACT9.610e-525.31Spherulation-specific family 4 n=1 Tax=Tautonia pl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021986Spherulation-specific family 4PFAMPF12138Spherulin4coord: 30..121
e-value: 1.6E-12
score: 47.6
IPR021986Spherulation-specific family 4PANTHERPTHR35040FAMILY NOT NAMEDcoord: 120..234
coord: 28..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.559

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9043contigEcto-sp13_S_contig9043:405..5037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9043.20599.1mRNA_Ecto-sp13_S_contig9043.20599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9043 405..5037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9043.20599.1 ID=prot_Ecto-sp13_S_contig9043.20599.1|Name=mRNA_Ecto-sp13_S_contig9043.20599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
VLAGTKLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDTSYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEIMAYQSEARVVFNTGQAADEQYFSFSPPAEVLGFE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTLYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGSDDADTEAIMATADPGDYGDRIMIAMNVEITETGDSTDRAAAVRDA
GAKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021986Spherulin4