prot_Ecto-sp13_S_contig9036.20594.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9036.20594.1
Unique Name	prot_Ecto-sp13_S_contig9036.20594.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	176

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9036.20594.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 4.190e-111
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0

Query:    1 MAGMVGASPHLPSVTAVSVDTLFLVVMMCSLVEVAAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA 175
            MAGMVGASPHLPSV AVSVDTLFLVVMMCSLVEV AGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA
Sbjct:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA 175

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9036.20594.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9036.20594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G9E7_ECTSI	4.190e-111	98.86	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..109
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 169..175
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..148
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..21
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 22..41
None	No IPR available	TMHMM	TMhelix		coord: 22..41
None	No IPR available	TMHMM	TMhelix		coord: 145..167
None	No IPR available	TMHMM	TMhelix		coord: 108..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9036	contig	Ecto-sp13_S_contig9036:335..2053 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9036.20594.1	mRNA_Ecto-sp13_S_contig9036.20594.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9036 335..2651 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9036.20594.1 ID=prot_Ecto-sp13_S_contig9036.20594.1|Name=mRNA_Ecto-sp13_S_contig9036.20594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MAGMVGASPHLPSVTAVSVDTLFLVVMMCSLVEVAAGFVMWKTSRVTRTE
AALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRR
LKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRA
AGSVGALSIVAMFLFGLVPRLSPSA*