prot_Ecto-sp13_S_contig903.20590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig903.20590.1
Unique Nameprot_Ecto-sp13_S_contig903.20590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length308
Homology
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Match: A0A6H5L4R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R6_9PHAE)

HSP 1 Score: 608 bits (1567), Expect = 1.100e-219
Identity = 296/307 (96.42%), Postives = 300/307 (97.72%), Query Frame = 0
Query:    1 MRPVLTLLCMAVAVVGKKQEEPLNKDTTPFWLRDQLDGMCLGPDGFGACDANNLWILALKHPKKLTQAFVSMLAPEPESMCLGSSSGGIFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKGTALEVVETPIHVAGMQIATADDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 307
            MR VLTLLCMAVAVVGKKQEE LNKDTTPFWLRDQLDGMCLGPDGFGACDA+NLWILALKHPKKLTQAFVSMLAPEPE MCLGSSSGG+FSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQL + GTALEVVETPIHVAGMQIAT DDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREG+TARKGDCKNKGAARWGWRDGKLTQGGKHCLGRG DNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE
Sbjct:    1 MRAVLTLLCMAVAVVGKKQEEALNKDTTPFWLRDQLDGMCLGPDGFGACDASNLWILALKHPKKLTQAFVSMLAPEPERMCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQL-SSGTALEVVETPIHVAGMQIATVDDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGQTARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGSDNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 306          
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Match: D8LIW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW7_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.300e-101
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
Query:  165 MQIATADDYCFDGARFRTCNDGDPTLRWGIGMDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRGATPRRFE 307
            MQIATADDYCFDGARFRTCNDGDPTLRWGIG+DFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNF+TPEIVPVG QQSMFGEQEKASTRRGATPRRFE
Sbjct:    1 MQIATADDYCFDGARFRTCNDGDPTLRWGIGIDFRSTEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKHCLGRGRDNKAIMVPCSEGHEHVNFITPEIVPVGTQQSMFGEQEKASTRRGATPRRFE 143          
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Match: D8LIW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW8_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 2.020e-34
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0
Query:   80 MCLGSSSGGIFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ 145
            MCLGSSSGG+FSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ
Sbjct:    1 MCLGSSSGGMFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQ 66          
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Match: A0A7S2P4G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4G1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.910e-31
Identity = 103/302 (34.11%), Postives = 141/302 (46.69%), Query Frame = 0
Query:    6 TLLCMAVAVVGKKQEEP----LNKDTTPFWLRDQLDGMCLGPDGFGACDANNLWILALKHPKKLTQAFVSMLAPEPESMCLG----SSSGGIFSSRRRVG-VSKCGSGNAK------NMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKGTA----------LEVVETPIHVAGMQIATADDYCFDGARFRTCNDGDPTLRWGIGMDF-RSTEPSRNLFYFFDREKCAVRE-GETARKGDCKNKGAARWGWRDGKLTQ-GGKHCLGRGRDNKAIMVPCSEGHEHVNFVTPEI 279
            TLL   +   G  Q        N+  T F+LRD  DGMCLG  GF  C+  +LW+ A +   K   + V +L P+    CL       +GG  S R  +  V +  +GN        N    D+ V         Q K  L       +NSA M  C K T+          LEVVET +H  G  + +ADDYCFDG +FR C+  D    WGIG++F +  + SR L  F     C V +   +   G+C++    RWG ++GKL++  GK C+ R  DN A   PC+E  E   + TPEI
Sbjct:   10 TLLLFTLLATGSDQANQDSANNNRGLTAFFLRDPTDGMCLGTHGFTECNTESLWLYASRGRNK-GHSLVLVLYPDFNGSCLSRLGPGVTGGPCSKRESMHWVIEGPNGNGHYRVKQTNTNAKDMCVARYKAATKKQSKELL-------KNSATMIPC-KPTSNKSEESGYVELEVVETAVHDVGFYLKSADDYCFDGLKFRECH-ADSNFLWGIGINFTKKGDLSRTLHKFHRPSSCLVEDHAGSLGLGNCESSKGQRWGLKEGKLSRDNGKICVVRKIDNAAATRPCTEAFE---YFTPEI 298          
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Match: A0A7S2XYA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.030e-22
Identity = 63/154 (40.91%), Postives = 83/154 (53.90%), Query Frame = 0
Query:   24 NKDTTPFWLRDQLDGMCLGPDGFGACDANNLWILALKHPKKLTQAFVSMLAPEPESMCLGSSSGGIFSSRRRVGVSKCGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKG-TALEVVETPIHVAGMQIATADDYCFD 176
            N+   PF+L+D LDG CLGP+GF ACD  +LWILA    +K   + V++L PE    CLG+ SG        V  SKC +  AK+  + D    G       Q K CL R +   ++S  +Q C  G T L+VVET IH  G  + +AD  CFD
Sbjct:   42 NRGNVPFFLQDPLDGECLGPNGFTACDTTSLWILA---GRKEGHSLVALLEPEEGKSCLGTGSG------NSVKASKCSTKQAKHWKI-DADRHGYYVISTDQAKMCLFRSKDPYKSSVKLQPCKSGYTPLQVVETAIHDVGFFLESADGMCFD 185          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig903.20590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L4R6_9PHAE1.100e-21996.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIW7_ECTSI1.300e-10197.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIW8_ECTSI2.020e-3498.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2P4G1_9STRA9.910e-3134.11Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2XYA8_9STRA1.030e-2240.91Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig903contigEcto-sp13_S_contig903:10159..17691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig903.20590.1mRNA_Ecto-sp13_S_contig903.20590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig903 10115..18597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig903.20590.1 ID=prot_Ecto-sp13_S_contig903.20590.1|Name=mRNA_Ecto-sp13_S_contig903.20590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp
MRPVLTLLCMAVAVVGKKQEEPLNKDTTPFWLRDQLDGMCLGPDGFGACD
ANNLWILALKHPKKLTQAFVSMLAPEPESMCLGSSSGGIFSSRRRVGVSK
CGSGNAKNMGLSDLSVQGDSGFLLAQGKNCLARGQGRLRNSADMQLCTKG
TALEVVETPIHVAGMQIATADDYCFDGARFRTCNDGDPTLRWGIGMDFRS
TEPSRNLFYFFDREKCAVREGETARKGDCKNKGAARWGWRDGKLTQGGKH
CLGRGRDNKAIMVPCSEGHEHVNFVTPEIVPVGMQQSMFGEQEKASTRRG
ATPRRFE*
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