prot_Ecto-sp13_S_contig9.20548.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9.20548.1
Unique Nameprot_Ecto-sp13_S_contig9.20548.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length268
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9.20548.1 vs. uniprot
Match: A0A6H5JRU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU2_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 9.140e-22
Identity = 99/227 (43.61%), Postives = 122/227 (53.74%), Query Frame = 0 
Query:    1 MAAARERLVVSSEKLRFAFSSFRAINEEVVARTTGVDALPLSQVTARRVSEAANMAKTVALSVLKAAEAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMESELNPPVVRDRRKQSRDDNSSTGSGHADSMASTGLEAEIGDIMVEVKTGKSDMSDEAEEAGHCTPQATEDIGEANESSHDRNAVSSFG-----STDQETQEEAE 222
            M AARERL  SSEKLR AF+S  A++ E  ARTT V  LPLS  T+R VS+AA MAKTVAL+VLKAAE A                            XXXXXXXX               ++SE +PP V +RR  S D++ S GS    SM+STG+E    ++ V VKT +SDMSD +EE    +    +  G  +ESS D +  S  G     S DQE Q+EAE
Sbjct:   51 MEAARERLTDSSEKLRLAFASLHAVDGEFAARTTDVGTLPLSLATSR-VSQAAGMAKTVALTVLKAAEEA------MAAATTARAEAVSAFAIKATTAXXXXXXXXAVKAQGMAKATATVTLKSETDPPTVMERRIPSGDNSGSNGSC---SMSSTGMEVATSNMAVAVKTSESDMSD-SEEQQKLSQHDVKATGGEHESSRDDDVTSEVGNADFRSADQERQKEAE 266
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BLAST of mRNA_Ecto-sp13_S_contig9.20548.1 vs. uniprot
Match: A0A6H5KPJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 5.250e-5
Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 0 
Query:  120 TAMESELNPPVVRDRRKQSRDDNSSTGSGHADSMASTGLEAEIGDIMVEVKTGKSDMSDEAEEAGHC-----------TPQATEDIGEANESSHDRNAVSSFGSTDQETQEEAE 222
            T ++SE++P V   RR  S   + + GSG   S + +G+EAE G +   VKT +SDMS+                   TPQ TEDIGE +ESSHD   VS  G+ D E   EAE
Sbjct:   54 TYVKSEMDPSVNY-RRTPSGYKSGNKGSG---STSCSGVEAENGGVTATVKTWESDMSEXXXXXXXXXXXXXXXXXEDTPQDTEDIGEEHESSHDGGLVSESGNADHERHGEAE 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9.20548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRU2_9PHAE9.140e-2243.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPJ3_9PHAE5.250e-540.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 233..253
NoneNo IPR availableCOILSCoilCoilcoord: 67..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9contigEcto-sp13_S_contig9:64527..66410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9.20548.1mRNA_Ecto-sp13_S_contig9.20548.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9 58139..66410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9.20548.1 ID=prot_Ecto-sp13_S_contig9.20548.1|Name=mRNA_Ecto-sp13_S_contig9.20548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=268bp
MAAARERLVVSSEKLRFAFSSFRAINEEVVARTTGVDALPLSQVTARRVS
EAANMAKTVALSVLKAAEAAEAAAATAEEVVSAVQEAKSAAAAKLSAAKE
AVEAAQAAKAAAEAAKAAATAMESELNPPVVRDRRKQSRDDNSSTGSGHA
DSMASTGLEAEIGDIMVEVKTGKSDMSDEAEEAGHCTPQATEDIGEANES
SHDRNAVSSFGSTDQETQEEAETTPGNNGGEQKEQEEGHGEEEQQEVQQQ
QEKHDQKKGHAQKVGQH*
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