prot_Ecto-sp13_S_contig89950.20539.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig89950.20539.1
Unique Name	prot_Ecto-sp13_S_contig89950.20539.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	153

Homology

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BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 5.410e-46
Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 0

Query:   29 MAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKSIAGRGVAMQASNGDSHIKCFNCQQ 134
            MAQGEDPD FFI +E++R+R KDM EI+SDERFED+ILQAISNDYDYVR TSFRVR  GL+EIKTTM++MYIDSLSR  TKS+AGRGVAM ASNGDS IKCFNC Q
Sbjct:    1 MAQGEDPDGFFITVEDVRQRPKDMVEIISDERFEDVILQAISNDYDYVRPTSFRVRHFGLEEIKTTMKSMYIDSLSRTWTKSVAGRGVAMPASNGDSIIKCFNCGQ 106

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BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.220e-22
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E   A   +L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY +++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFTELKANYNRVTDEVISAKLNDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKFIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

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BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.020e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.120e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.220e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.220e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.280e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.280e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.010e-22
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  ++   FR     +++++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  135 AFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 280

[Close]

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Match: A0A6H5KFV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.500e-21
Identity = 61/148 (41.22%), Postives = 81/148 (54.73%), Query Frame = 0

Query:    1 AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLKDMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYIDSLSRVSTKS-IAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPAR 147
            A+  L   Y+  T E  RA  ++L    M  GE+PDDFF K   LR +L+ MGE +SD RF+DI +Q  S DY  +    FR     + +++ TMRN+++D   R  TK  IAGRG AM      S   CF C + GH RR+CP   R
Sbjct:  116 AFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQVFSEDYKDINIMVFRGLSFDVHKMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKT--SGPICFECNEPGHVRRNCPNRQR 261

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig89950.20539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24


Match Name	E-value	Identity	Description
A0A6H5JWF9_9PHAE	5.410e-46	79.25	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KMR7_9PHAE	1.220e-22	40.54	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KN28_9PHAE	2.020e-22	41.22	Uncharacterized protein (Fragment) n=3 Tax=Ectocar...	[more]
A0A6H5KJB9_9PHAE	2.120e-22	41.22	Uncharacterized protein (Fragment) n=2 Tax=Ectocar...	[more]
A0A6H5K3T5_9PHAE	2.220e-22	41.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1Z9_9PHAE	2.220e-22	41.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTQ0_9PHAE	2.280e-22	41.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KHG5_9PHAE	2.280e-22	41.22	Uncharacterized protein n=11 Tax=Ectocarpus sp. CC...	[more]
A0A6H5JUN9_9PHAE	3.010e-22	41.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFV1_9PHAE	2.500e-21	41.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 128..144 e-value: 0.0016 score: 27.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 127..144 e-value: 4.3E-7 score: 29.7
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 128..144 score: 10.263
None	No IPR available	GENE3D	4.10.60.10		coord: 108..153 e-value: 1.1E-6 score: 30.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 1..94 e-value: 4.0E-11 score: 42.7
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 119..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig89950	contig	Ecto-sp13_S_contig89950:9..467 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig89950.20539.1	mRNA_Ecto-sp13_S_contig89950.20539.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig89950 9..467 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig89950.20539.1 ID=prot_Ecto-sp13_S_contig89950.20539.1|Name=mRNA_Ecto-sp13_S_contig89950.20539.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
AWLALAEKYDSHTKETRRACYEELTTNKMAQGEDPDDFFIKMENLRERLK
DMGEIVSDERFEDIILQAISNDYDYVRQTSFRVRDIGLKEIKTTMRNMYI
DSLSRVSTKSIAGRGVAMQASNGDSHIKCFNCQQHGHRRRDCPEPARPWQ
QQQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR036875	Znf_CCHC_sf