prot_Ecto-sp13_S_contig899.20532.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig899.20532.1
Unique Nameprot_Ecto-sp13_S_contig899.20532.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length272
Homology
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BLAST of mRNA_Ecto-sp13_S_contig899.20532.1 vs. uniprot
Match: D8LH49_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH49_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 3.350e-106
Identity = 232/271 (85.61%), Postives = 236/271 (87.08%), Query Frame = 0 
Query:    1 MKGSAPDTQDETGRTRLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAEHDATDINRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSVAGVSDASDTRDLEESSCQVVELLIGAGADVGAKNDRGEKPVDLVTNESVMALLVSAAQELDKREEEEAAEAERKCAPEASSNALSTATTTAARPLGQTAGWPTKQQQQQGAGTESKAFTRQGVAGGPTPGSAAGTKKKIVIKLKKKT 271
            MKGS PDTQDETGRT LHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAE DATDIN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSVAGVSD SDTRDLEESSCQVVELLIGAGADVGAKNDRGEKPVDLVTNESV+ALLVSAAQELDKRE                           A P+GQTAGWPTKQQQQQGAGT SKAFT+QGVAGGPT G+AAGTKKKIVIKLKKKT
Sbjct:    1 MKGSIPDTQDETGRTSLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAELDATDINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSVAGVSDTSDTRDLEESSCQVVELLIGAGADVGAKNDRGEKPVDLVTNESVLALLVSAAQELDKREXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPIGQTAGWPTKQQQQQGAGTASKAFTKQGVAGGPTAGAAAGTKKKIVIKLKKKT 271
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BLAST of mRNA_Ecto-sp13_S_contig899.20532.1 vs. uniprot
Match: UPI00077A8294 (putative ankyrin repeat protein RBE_0317 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A8294)

HSP 1 Score: 55.8 bits (133), Expect = 4.730e-6
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    7 DTQDETGRTRLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAEHDATDIN 74
            D +D  G+T LH +   G VD V +LL + A+PN +D   + P+ +A   G  EVV+AL  H AT++N
Sbjct:   48 DKRDSYGKTALHCSVSAGQVDTVKYLLYNHADPNIKDHREEAPLHVAVRTGNVEVVEALLNHTATNVN 115
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BLAST of mRNA_Ecto-sp13_S_contig899.20532.1 vs. uniprot
Match: UPI001863FEFD (ankyrin repeat and EF-hand domain-containing protein 1 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863FEFD)

HSP 1 Score: 57.4 bits (137), Expect = 1.100e-5
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:   13 GRTRLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAEHDA 70
            G T LHQA++  D D V FLLS GA P++QD   +TPV LA + GLY++V+ LA   A
Sbjct:   50 GLTALHQASMANDGDMVRFLLSVGAFPDSQDKTGRTPVMLATQLGLYDIVELLASKGA 107
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BLAST of mRNA_Ecto-sp13_S_contig899.20532.1 vs. uniprot
Match: UPI001CF57F84 (transient receptor potential cation channel subfamily A member 1-like isoform X1 n=4 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF57F84)

HSP 1 Score: 55.8 bits (133), Expect = 3.880e-5
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    7 DTQDETGRTRLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPVTLAAERGLYEVVKALAEHDATDIN 74
            D +D  G+T LH +   G VD V +LL + A+PN +D   + P+ +A   G  EVV+AL  H AT++N
Sbjct:  189 DKRDSYGKTALHCSVSAGQVDTVKYLLYNHADPNIKDHREEAPLHVAVRTGNVEVVEALLNHTATNVN 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig899.20532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH49_ECTSI3.350e-10685.61Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH49... [more]
UPI00077A82944.730e-641.18putative ankyrin repeat protein RBE_0317 n=1 Tax=A... [more]
UPI001863FEFD1.100e-551.72ankyrin repeat and EF-hand domain-containing prote... [more]
UPI001CF57F843.880e-541.18transient receptor potential cation channel subfam... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 42..112
coord: 3..68
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 71..213
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 71..213
coord: 42..112
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 3..68
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 143..157
score: 43.7
coord: 13..28
score: 39.58
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 12..41
e-value: 0.13
score: 21.4
coord: 45..75
e-value: 0.012
score: 24.8
coord: 79..109
e-value: 0.0081
score: 25.4
coord: 113..156
e-value: 0.78
score: 18.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 13..43
e-value: 0.017
score: 15.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 12..44
score: 12.636
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 113..159
score: 8.87
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 52..158
e-value: 2.3E-11
score: 44.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..167
score: 30.662
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..179
e-value: 1.2E-42
score: 147.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig899contigEcto-sp13_S_contig899:13031..16708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig899.20532.1mRNA_Ecto-sp13_S_contig899.20532.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig899 12012..16761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig899.20532.1 ID=prot_Ecto-sp13_S_contig899.20532.1|Name=mRNA_Ecto-sp13_S_contig899.20532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
MKGSAPDTQDETGRTRLHQAAVKGDVDEVGFLLSSGANPNTQDAHLQTPV
TLAAERGLYEVVKALAEHDATDINRQDSFGRTPLHWCAKRCDVKAAKLLL
GTGKASVHVTTTGGDTALHWACSVAGVSDASDTRDLEESSCQVVELLIGA
GADVGAKNDRGEKPVDLVTNESVMALLVSAAQELDKREEEEAAEAERKCA
PEASSNALSTATTTAARPLGQTAGWPTKQQQQQGAGTESKAFTRQGVAGG
PTPGSAAGTKKKIVIKLKKKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf