prot_Ecto-sp13_S_contig8988.20528.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8988.20528.1
Unique Nameprot_Ecto-sp13_S_contig8988.20528.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8988.20528.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 1.230e-60
Identity = 120/127 (94.49%), Postives = 121/127 (95.28%), Query Frame = 0 
Query:    1 DGSRAGGAGVDKINEEAFRPHHGGVVGGVLLRRQPADSTLPETTFSFRTAATPGRPSDNELASSRRLXXXXXXQQVSTATVSKGSAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEM 127
            DGSRAGGAGVDKINEEAFRPHHGG VGGVLLRRQPADS LP T  SFRTAATPGRPSDNELASSRRLXXXXXXQQ STATVSKG+AIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEM
Sbjct:  440 DGSRAGGAGVDKINEEAFRPHHGGAVGGVLLRRQPADSALPGTALSFRTAATPGRPSDNELASSRRLXXXXXXQQGSTATVSKGNAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEM 566
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8988.20528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI1.230e-6094.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8988contigEcto-sp13_S_contig8988:3736..4116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8988.20528.1mRNA_Ecto-sp13_S_contig8988.20528.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8988 3736..4116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8988.20528.1 ID=prot_Ecto-sp13_S_contig8988.20528.1|Name=mRNA_Ecto-sp13_S_contig8988.20528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
DGSRAGGAGVDKINEEAFRPHHGGVVGGVLLRRQPADSTLPETTFSFRTA
ATPGRPSDNELASSRRLMPPPPRQQVSTATVSKGSAIIAASGSPLVASAH
EGLQRMRAVLEQRALEVGRAHDDSKEM
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