prot_Ecto-sp13_S_contig8984.20525.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8984.20525.1
Unique Nameprot_Ecto-sp13_S_contig8984.20525.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length73
Homology
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A6H5KXM9_9PHAE (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXM9_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 5.530e-38
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYP 69
            QVYISYGPKGN+DLLLLYGFSLDRNPYNSVDVTISLDENDELYE KKAFLSEAGLPPTKAFPLYNDRYP
Sbjct:  429 QVYISYGPKGNADLLLLYGFSLDRNPYNSVDVTISLDENDELYERKKAFLSEAGLPPTKAFPLYNDRYP 497          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A836CJC2_9STRA (Putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.680e-26
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYP 69
            Q+YISYGPK N+DLLLLYGF+LDRNP+NSVD+T++LD ND L+  KKAFL   G P T  FP+YNDRYP
Sbjct:  350 QIYISYGPKSNADLLLLYGFALDRNPFNSVDITVALDGNDPLFPQKKAFLDGVGQPTTMNFPMYNDRYP 418          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A2V3ITI5_9FLOR (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI5_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 1.900e-23
Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYPVGL 72
            QV+++YGPK NSDLLLLYGF  DRNPY+SV++ +SL E+D LYE K A+L+++G+  T  FPLY DRYP+ L
Sbjct:  316 QVFVTYGPKSNSDLLLLYGFVSDRNPYDSVELVVSLSESDPLYERKLAYLAQSGISSTSTFPLYRDRYPMEL 387          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A7S3UXM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM7_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 6.110e-23
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYP 69
            QV+ISYG K N +LLLLYGF+LDRNPYN+VD+T+ L E+D L+E K+AFL+  GL P   FP+YNDRYP
Sbjct:  292 QVFISYGQKSNLELLLLYGFALDRNPYNAVDLTVVLPESDPLFEGKRAFLATKGLKPEMEFPVYNDRYP 360          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: R7QNG5_CHOCR (SET domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNG5_CHOCR)

HSP 1 Score: 99.0 bits (245), Expect = 1.120e-22
Identity = 42/72 (58.33%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYPVGL 72
            QV+++YGPK N DLLLLYGF  DRNPY+SV++ ++L + DEL+E KK +L E+G+  T  FPLY+DRYP+ L
Sbjct:  286 QVFVTYGPKSNGDLLLLYGFITDRNPYDSVELVVALSDEDELFERKKKYLDESGVGTTATFPLYSDRYPMEL 357          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A7R9WEZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEZ4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.240e-22
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLD---ENDELYELKKAFLSEAGLPPTKAFPLYNDRYPV 70
            Q+YISYGPK N+DLLLLYGF+L+RNPYNSVDVT+S++   ++D L + K AFL +AG   T  FP Y DRYP+
Sbjct:   89 QIYISYGPKSNADLLLLYGFALERNPYNSVDVTVSINADSDSDPLAKEKIAFLEKAGTDKTVDFPCYADRYPI 161          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A7S1TI34_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI34_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 3.090e-21
Identity = 44/70 (62.86%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYPV 70
            QVY++YG K N +LLLLYGF LDRNPY+SVD+TISLD  D LYE K+ FL + G   ++ FPLY DRYP+
Sbjct:  246 QVYVTYGQKANWELLLLYGFVLDRNPYDSVDLTISLDAADPLYERKRKFLVDCGRRSSETFPLYFDRYPM 315          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A0G4EI96_VITBC (SET domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EI96_VITBC)

HSP 1 Score: 94.0 bits (232), Expect = 9.320e-21
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYPVGLF 73
            QVY+SYG K N+DLLLLYGF+LDRNP+N+V +   LD NDELY+ K AF+ +AGLP    FP+ +D++P  +F
Sbjct:  389 QVYVSYGQKSNADLLLLYGFALDRNPHNTVSLDFQLDPNDELYDDKMAFVDKAGLPSRIFFPVGDDKFPSEMF 461          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: M2XZ07_GALSU (Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZ07_GALSU)

HSP 1 Score: 91.7 bits (226), Expect = 5.320e-20
Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPPTKAFPLYNDRYPV 70
            QVY+SYGP+ N +LLLLYGFSL+RNP++ V++TI LD+ D LY  K   L   G  P ++FPLY DRYPV
Sbjct:  322 QVYVSYGPRSNQELLLLYGFSLERNPFDCVEITIGLDKTDPLYLEKCRMLESYGKSPLQSFPLYMDRYPV 391          
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Match: A0A1X6NW70_PORUM (SET domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW70_PORUM)

HSP 1 Score: 89.4 bits (220), Expect = 3.710e-19
Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    1 QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFLSEAGLPP--TKAFPLYNDRYPVGL 72
            QVY +YG K N++LLLLYGF +DRNPY++VDV++++DE D LYE K+ FL  AG     + AFPLY DRYP+ L
Sbjct:  334 QVYTTYGQKTNAELLLLYGFVVDRNPYDAVDVSVAVDEGDPLYERKREFLEGAGQEAGTSVAFPLYADRYPMEL 407          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8984.20525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXM9_9PHAE5.530e-3897.10SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CJC2_9STRA2.680e-2669.57Putative ribulose-1,5-bisphosphate carboxylase/oxy... [more]
A0A2V3ITI5_9FLOR1.900e-2361.11Ribulose-1,5 bisphosphate carboxylase/oxygenase la... [more]
A0A7S3UXM7_HETAK6.110e-2365.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R7QNG5_CHOCR1.120e-2258.33SET domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7R9WEZ4_9STRA1.240e-2261.64Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1TI34_9RHOD3.090e-2162.86Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0G4EI96_VITBC9.320e-2157.53SET domain-containing protein n=2 Tax=Vitrella bra... [more]
M2XZ07_GALSU5.320e-2058.57Ribulose-1,5-bisphosphate carboxylase/oxygenase sm... [more]
A0A1X6NW70_PORUM3.710e-1958.11SET domain-containing protein n=1 Tax=Porphyra umb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036464Rubisco LSMT, substrate-binding domain superfamilyGENE3D3.90.1420.10coord: 23..73
e-value: 1.0E-7
score: 33.8
NoneNo IPR availablePANTHERPTHR13271:SF98RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE SMALL SUBUNIT N-METHYLTRANSFERASE I-RELATEDcoord: 1..72
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8984contigEcto-sp13_S_contig8984:545..1618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8984.20525.1mRNA_Ecto-sp13_S_contig8984.20525.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8984 545..1618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8984.20525.1 ID=prot_Ecto-sp13_S_contig8984.20525.1|Name=mRNA_Ecto-sp13_S_contig8984.20525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp
QVYISYGPKGNSDLLLLYGFSLDRNPYNSVDVTISLDENDELYELKKAFL
SEAGLPPTKAFPLYNDRYPVGLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036464Rubisco_LSMT_subst-bd_sf