prot_Ecto-sp13_S_contig8981.20522.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8981.20522.1
Unique Nameprot_Ecto-sp13_S_contig8981.20522.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length227
Homology
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 6.300e-68
Identity = 153/200 (76.50%), Postives = 157/200 (78.50%), Query Frame = 0
Query:    1 SLGETWERLDDQLKSRCVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRALAEAAQHPSNNRTSQTAKSHAGDGGKRGXXXXXGAESRDDGSEMDGIDYGDEXXXXXXXXXXXXXGSDEDFEVPASVKRGMGRQA 200
            SLGE W+RLDDQ KSRCV+KALELLAKEDPLNYFAEPV            SNPLDFSTIKKRQKKGRYAKLGFSAL EDI TVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRAL EAAQHPSNN T+QTAKSHAG      XXXXX                   XXXXXXXXXXXXXGSDEDFEVPASVKRG+GRQA
Sbjct: 3397 SLGEGWDRLDDQQKSRCVMKALELLAKEDPLNYFAEPV------------SNPLDFSTIKKRQKKGRYAKLGFSALREDISTVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRALTEAAQHPSNNGTAQTAKSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDEDFEVPASVKRGIGRQA 3584          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: BAZ2A_XENLA (Bromodomain adjacent to zinc finger domain protein 2A n=3 Tax=Xenopus laevis TaxID=8355 RepID=BAZ2A_XENLA)

HSP 1 Score: 67.0 bits (162), Expect = 3.490e-9
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   17 CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            C I  +EL + ED    F EPV+  LVPGYR ++ NP+DFST++ +   G Y++    A  ED   ++ N QL+N+DESD   V + GL
Sbjct: 1594 CEIILMELESHEDAWP-FLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSRCEEFA--EDAELIFSNCQLFNEDESD---VGKAGL 1676          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A8J5XFC9_DIALT (Bromo domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFC9_DIALT)

HSP 1 Score: 66.2 bits (160), Expect = 4.010e-9
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   18 VIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRALAEAA 120
            ++K L  +AK      F  PV     P Y+D++  P+DFSTI+KR + G+ + LG  +L +D+  V+ NAQLYN   SD   +A       A  + R LAE A
Sbjct:  139 LLKMLNAIAKHKWAYPFKRPVTDKEAPDYKDIIKQPMDFSTIRKRIEAGQVSTLG--SLRDDLALVFSNAQLYNSTASDYSKMAASLQQHAALEMQRLLAETA 239          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A2G9S926_LITCT (Uncharacterized protein (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9S926_LITCT)

HSP 1 Score: 66.6 bits (161), Expect = 4.460e-9
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   17 CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            C I  +E+ + +D    F EPV+  LVPGYR ++ NP+DFST++ +   GRY+     A  ED   V+ N QL+N+DESD   V + GL
Sbjct:  980 CEIILMEMESHDDAWP-FLEPVNPRLVPGYRKIIKNPMDFSTMRNKLLNGRYSSCVEFA--EDAELVFSNCQLFNEDESD---VGKAGL 1062          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: UPI001AAD42F7 (bromodomain adjacent to zinc finger domain protein 2A n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD42F7)

HSP 1 Score: 66.6 bits (161), Expect = 4.720e-9
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   17 CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            C I  +E+ + +D    F EPV+  LVPGYR +++NP+DFST++ +   G Y+     A  ED   V+RN QL+N+DESD   V + GL
Sbjct: 1619 CEIILMEMESHDDAWP-FLEPVNPRLVPGYRKIITNPMDFSTMRNKLLNGGYSNCVEFA--EDAELVFRNCQLFNEDESD---VGKAGL 1701          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A821IKP9_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821IKP9_9NEOB)

HSP 1 Score: 66.2 bits (160), Expect = 5.610e-9
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   17 CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            C I  +E+ + +D    F EPV+  LVPGYR ++ NP+DFST++ +   GRY    +    ED   V+ N QL+N+D+S   IV + GL
Sbjct:  644 CEIILMEMESHDDAWP-FLEPVNPRLVPGYRKIIKNPMDFSTMRNKLLNGRYTS--YQEFAEDAELVFSNCQLFNEDDS---IVGKAGL 726          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: F6T5B1_XENTR (Bromodomain adjacent to zinc finger domain 2A n=4 Tax=Xenopus tropicalis TaxID=8364 RepID=F6T5B1_XENTR)

HSP 1 Score: 65.9 bits (159), Expect = 8.610e-9
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   17 CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            C I  +EL + ED    F EPV+  LVPGYR ++ NP+DFSTI+ +   G+Y+     A  ED   V+ N QL+N+D+S+   V + GL
Sbjct: 1597 CEIILMELESHEDAWP-FLEPVNPRLVPGYRKIIKNPMDFSTIRHKLLNGKYSSCEEFA--EDAELVFSNCQLFNEDDSE---VGKAGL 1679          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A7S3TUP4_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TUP4_EMIHU)

HSP 1 Score: 65.5 bits (158), Expect = 8.670e-9
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   21 ALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGL 105
            AL+ L   DPL YFA+PVD   +P YR V+ +P+DFST++ R ++G Y+      L +D   + RNA ++N   ++ + VA K L
Sbjct:  357 ALDELQALDPLGYFAQPVDDEAIPEYRTVIPDPMDFSTMRVRLRRGEYSSP--LQLADDFVLLCRNALVFNPSATNPYRVAAKSL 439          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A7S3AVJ6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AVJ6_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 9.260e-9
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 0
Query:    2 LGETWERL--DDQLKSR------CVIKALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIVAQKGLDSM 108
            + E+WE +  DD+  SR       +IK L+ + K      F  PV     P Y+D+++NP+DFST++KR + G   +   +AL  D+  ++ NA LYN   SD   +AQ   D++
Sbjct:   73 IDESWEEIARDDERNSRRATVSGTLIKLLQAIMKHKWAYPFKRPVTDKEAPDYKDIIANPMDFSTLRKRIETGAVTEA--AALVTDLNLIFDNAMLYNARGSDYHKMAQTLKDTV 185          
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Match: A0A061QRC8_9CHLO (Bromodomain-containing protein 7/9 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRC8_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 1.420e-8
Identity = 38/101 (37.62%), Postives = 55/101 (54.46%), Query Frame = 0
Query:   20 KALELLAKEDPLNYFAEPVDISLVPGYRDVVSNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDES--DCFIVAQKGLDSMADRLGRALAE 118
            K ++ + K+D  + F EPV   L PGY DV+SNP+DF+TI+ R  + RYA   +  L ED+  ++ NA  YN  E+      +  K L      LGR  A+
Sbjct:  257 KVVDAIQKKDTYDIFREPVTEDLAPGYFDVISNPMDFTTIRARISEERYAS--WDELEEDLVLMFDNAMTYNGPETLFHKLALTMKELSQKVVALGRQGAQ 355          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8981.20522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G873_ECTSI6.300e-6876.50Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
BAZ2A_XENLA3.490e-942.70Bromodomain adjacent to zinc finger domain protein... [more]
A0A8J5XFC9_DIALT4.010e-937.86Bromo domain-containing protein n=2 Tax=Diacronema... [more]
A0A2G9S926_LITCT4.460e-942.70Uncharacterized protein (Fragment) n=1 Tax=Lithoba... [more]
UPI001AAD42F74.720e-942.70bromodomain adjacent to zinc finger domain protein... [more]
A0A821IKP9_9NEOB5.610e-940.45(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
F6T5B1_XENTR8.610e-942.70Bromodomain adjacent to zinc finger domain 2A n=4 ... [more]
A0A7S3TUP4_EMIHU8.670e-940.00Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S3AVJ6_9EUKA9.260e-933.91Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A061QRC8_9CHLO1.420e-837.62Bromodomain-containing protein 7/9 (Fragment) n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 43..59
score: 39.9
coord: 79..98
score: 28.26
IPR001487BromodomainSMARTSM00297bromo_6coord: 10..117
e-value: 1.3E-8
score: 44.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 21..102
e-value: 2.1E-13
score: 50.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 34..98
score: 14.555
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 4..134
e-value: 2.6E-19
score: 71.3
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 15..113
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 15..217
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 15..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8981contigEcto-sp13_S_contig8981:1241..3775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8981.20522.1mRNA_Ecto-sp13_S_contig8981.20522.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8981 1241..3777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8981.20522.1 ID=prot_Ecto-sp13_S_contig8981.20522.1|Name=mRNA_Ecto-sp13_S_contig8981.20522.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp
SLGETWERLDDQLKSRCVIKALELLAKEDPLNYFAEPVDISLVPGYRDVV
SNPLDFSTIKKRQKKGRYAKLGFSALWEDIGTVYRNAQLYNQDESDCFIV
AQKGLDSMADRLGRALAEAAQHPSNNRTSQTAKSHAGDGGKRGGGGGAGA
ESRDDGSEMDGIDYGDEEEEEEDSPEEEDDGSDEDFEVPASVKRGMGRQA
AAAAAAAAAAADAARDEDEDSDYYDAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf