prot_Ecto-sp13_S_contig8974.20511.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8974.20511.1
Unique Nameprot_Ecto-sp13_S_contig8974.20511.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length779
Homology
BLAST of mRNA_Ecto-sp13_S_contig8974.20511.1 vs. uniprot
Match: D8LFM1_ECTSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM1_ECTSI)

HSP 1 Score: 887 bits (2291), Expect = 1.820e-302
Identity = 492/611 (80.52%), Postives = 503/611 (82.32%), Query Frame = 0
Query:  180 MGVDHLLWATTVAAGNCKCSVPVLVSCDWDGLVDDDSSGGVVVQSGASCKGYSTPGSKGVACSVRFQTAWTEKPSRECLFLDGLTELFLSKIRDAHCLPGRAFAPLVSTTVQQSWEWTKPEEEAAQLPAPALPLEGGXXXXXXXXXXXXEFVPAMAVVEEGNGCRGGTSLGESTVGGDPQGPTTPGAXXXXXXXXXXDSGGVRAREDAVRQLLRAVGGGSGQESRTPVWGPDEDPLVSIFVKVRWTDLREGLVEESQHYTTLEPLPEEARGGVAGVDGGYSGAGVGGHWFVSPRRGVVRWKQQGQLTTDASSXXXXXXXXXXXXXXXXXHRGRLGDACSRLLAALVLTTAMHQGTLMADLGTGSLEDGRTALAQDYGKAASAMLSDETRKAVEEMCHRSKSPSINHDDIDLILRYLLHSQGEERAVATTANQGCGGESREGLDADGDNKARRVQPPLTSSRWRQVHLGARQQDPRQSPEKXXQVYPRARGVTDDSSKRQLQPEGGA-----------------TMEMSWAELSTSGSGRASSDETMVGGREGRRSLWAWAERGGAPIGRLLSLLALRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM 773
            MGVDHLLWATTVAAGNC+CSVPVLVSCDWDGLV+DDSSGGVVVQSGASCKGYSTPGSKGVACSVRFQTAWTEKPSRECLFLDGLT+LFLSKIRDAHCLPGRAFAP+VSTTVQQSWEWTKPEEEAAQLPAPALP EGGXXXXXXXXXXXX         +   G RGGTSLGE TVGGDPQGPTT    XXXXXXX  D GGV +REDAVRQLLRA+GGG  QE  TPVWGPDEDPLVSIFV+VRWTDLREGLVEESQHYTTLEPLPEEAR G  G DGGYSGAGVGGHWFVSPR                                     GRLGDACSRLLAALVLTTAMH GTLMADLG GSLEDGRTALAQDYGKAASA LSDETRKAVEEMC RS+SPSINHDDIDLILRYLLHSQGEERAV   ANQG GG    G DADGDNKARRVQPPL SSRWRQVHLGARQQDPRQS EK  QVYPRARGVTDDSSKR+LQP GGA                 TME SWAELS SGSGRASS ETM GGR GRRSLWAWAERGGAPIGRLLSLL+LRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM
Sbjct:    1 MGVDHLLWATTVAAGNCRCSVPVLVSCDWDGLVEDDSSGGVVVQSGASCKGYSTPGSKGVACSVRFQTAWTEKPSRECLFLDGLTDLFLSKIRDAHCLPGRAFAPIVSTTVQQSWEWTKPEEEAAQLPAPALPWEGGXXXXXXXXXXXXXXXXXXXXXD---GRRGGTSLGEPTVGGDPQGPTT----XXXXXXXAGDRGGVGSREDAVRQLLRAIGGGREQEIGTPVWGPDEDPLVSIFVRVRWTDLREGLVEESQHYTTLEPLPEEARAGAGGADGGYSGAGVGGHWFVSPR-------------------------------------GRLGDACSRLLAALVLTTAMHPGTLMADLGAGSLEDGRTALAQDYGKAASAKLSDETRKAVEEMCRRSQSPSINHDDIDLILRYLLHSQGEERAVVPAANQGSGG----GPDADGDNKARRVQPPLPSSRWRQVHLGARQQDPRQSTEKWKQVYPRARGVTDDSSKRRLQPGGGAAEPASVPNDPSHGDVNRTMEASWAELSASGSGRASSYETMTGGRGGRRSLWAWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM 563          
BLAST of mRNA_Ecto-sp13_S_contig8974.20511.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE)

HSP 1 Score: 870 bits (2247), Expect = 9.300e-295
Identity = 502/611 (82.16%), Postives = 511/611 (83.63%), Query Frame = 0
Query:  180 MGVDHLLWATTVAAGNCKCSVPVLVSCDWDGLVDDDSSGGVVVQSGASCKGYSTPGSKGVACSVRFQTAWTEKPSRECLFLDGLTELFLSKIRDAHCLPGRAFAPLVSTTVQQSWEWTKPEEEAAQLPAPALPLEGGXXXXXXXXXXXXEFVPAMAVVEEGNGCRGGTSLGESTVGGDPQGPTTPGAXXXXXXXXXXDSGGVRAREDAVRQLLRAVGGGSGQESRTPVWGPDEDPLVSIFVKVRWTDLREGLVEESQHYTTLEPLPEEARGGVAGVDGGYSGAGVGGHWFVSPRRGVVRWKQQGQLTTDASSXXXXXXXXXXXXXXXXXHRGRLGDACSRLLAALVLTTAMHQGTLMADLGTGSLEDGRTALAQDYGKAASAMLSDETRKAVEEMCHRSKSPSINHDDIDLILRYLLHSQGEERAVATTANQGCGGESREGLDADGDNKARRVQPPLTSSRWRQVHLGARQQDPRQSPEKXXQVYPRARGVTDDSSKRQLQPEGGA-----------------TMEMSWAELSTSGSGRASSDETMVGGREGRRSLWAWAERGGAPIGRLLSLLALRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM 773
            MGVDHLLWATTVAAGNCKCSVPVLVSCDWDGLVDDDSSGGVVVQSGASCKGYSTPGS G+ACSVRF TAWTEKPSRECLFLDGLT+LFLSKIRDAHCLPGRAFAP+VSTTVQQSWEWTKPEE+AAQLPAPALP EGG XXXXXXXXX   F             RGGTSLGE   GGDPQGP      XXXXXXXXX      AREDAVRQLLRAVGGGSGQESRTPVWGPDEDPLVSIFV+VRWTDLREGLVEESQHYTTLEPLPEEARGG  G DG YSGAGVGGH                        XXXXXXXXXXXXXXXXXHRGRLGDACSRLLAALVLTTAMH GTLMADLG GSLEDGRTALAQDYGKAASAMLSDETRKAVE+MC RSKSPSINHDDIDLILRYLLHSQGEE AVAT ANQGCGG     LDADG+NKARRVQP L SSRWRQVHLG RQQD RQS EK  QVYPRARGVTDDSS RQLQPEGGA                 TME SWAELSTSGSGRASSDETM+GGREGRRSLW WAERGGAPIGRLLSLL+LRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM
Sbjct:    1 MGVDHLLWATTVAAGNCKCSVPVLVSCDWDGLVDDDSSGGVVVQSGASCKGYSTPGSTGIACSVRFHTAWTEKPSRECLFLDGLTDLFLSKIRDAHCLPGRAFAPIVSTTVQQSWEWTKPEEDAAQLPAPALPWEGGGXXXXXXXXX---FXXXXXXXXXXXXRRGGTSLGEFPGGGDPQGPXX----XXXXXXXXXXXXXXXAREDAVRQLLRAVGGGSGQESRTPVWGPDEDPLVSIFVRVRWTDLREGLVEESQHYTTLEPLPEEARGGAGGADGSYSGAGVGGH-----------------CDNXXXXXXXXXXXXXXXXXXXXXHRGRLGDACSRLLAALVLTTAMHPGTLMADLGAGSLEDGRTALAQDYGKAASAMLSDETRKAVEDMCRRSKSPSINHDDIDLILRYLLHSQGEEGAVATAANQGCGG-----LDADGNNKARRVQPSLPSSRWRQVHLGTRQQDRRQSTEKWKQVYPRARGVTDDSSLRQLQPEGGAAERTSVPNDQSHRDVHGTMEASWAELSTSGSGRASSDETMMGGREGRRSLWVWAERGGAPIGRLLSLLSLRVASCDDLGSMSLLWMSFVRDVRLLWEDGATIARM 582          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8974.20511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFM1_ECTSI1.820e-30280.52Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6H5JCY7_9PHAE9.300e-29582.16Rab3 GTPase-activating protein catalytic subunit n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3 GTPase-activating protein catalytic subunitPANTHERPTHR21422FAMILY NOT NAMEDcoord: 9..774
NoneNo IPR availablePANTHERPTHR21422:SF9RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITcoord: 9..774

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8974contigEcto-sp13_S_contig8974:361..6564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8974.20511.1mRNA_Ecto-sp13_S_contig8974.20511.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8974 361..6564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8974.20511.1 ID=prot_Ecto-sp13_S_contig8974.20511.1|Name=mRNA_Ecto-sp13_S_contig8974.20511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=779bp
VGDGASGDVDEIGQWEDYTCQGQFEDLVRSFETVLREWRISDREDHALPS
NEAVAVEGIVSSLTESSGPSTSPPAVSYSQCLEHDGQLFSIQLVPPPDQL
TVTAADEAPPTTTTATTAETPPTTTATPNRTASAACQLEDRRLDFAVGGG
ETTNTPLHRWFGLKQYVLVRALGQGGSPGMGVDHLLWATTVAAGNCKCSV
PVLVSCDWDGLVDDDSSGGVVVQSGASCKGYSTPGSKGVACSVRFQTAWT
EKPSRECLFLDGLTELFLSKIRDAHCLPGRAFAPLVSTTVQQSWEWTKPE
EEAAQLPAPALPLEGGGDTGGGGGGGGGEFVPAMAVVEEGNGCRGGTSLG
ESTVGGDPQGPTTPGAAAAAAAAAAGDSGGVRAREDAVRQLLRAVGGGSG
QESRTPVWGPDEDPLVSIFVKVRWTDLREGLVEESQHYTTLEPLPEEARG
GVAGVDGGYSGAGVGGHWFVSPRRGVVRWKQQGQLTTDASSSSDNDGDCG
STQQQQQQHRGRLGDACSRLLAALVLTTAMHQGTLMADLGTGSLEDGRTA
LAQDYGKAASAMLSDETRKAVEEMCHRSKSPSINHDDIDLILRYLLHSQG
EERAVATTANQGCGGESREGLDADGDNKARRVQPPLTSSRWRQVHLGARQ
QDPRQSPEKWKQVYPRARGVTDDSSKRQLQPEGGATMEMSWAELSTSGSG
RASSDETMVGGREGRRSLWAWAERGGAPIGRLLSLLALRVASCDDLGSMS
LLWMSFVRDVRLLWEDGATIARMVRGAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3-GAP_cat_su