prot_Ecto-sp13_S_contig8967.20505.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8967.20505.1
Unique Nameprot_Ecto-sp13_S_contig8967.20505.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8967.20505.1 vs. uniprot
Match: A0A6H5L2D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D8_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.740e-41
Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 0 
Query:    1 MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHSAGGEGGAGGEGLIISPPVPAVARPSRPGRGRARLTKRS 86
            MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEH+AG EGG GGEG  ISPPVPAVARPSRPGRGRARLTKRS
Sbjct:  171 MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGREGGVGGEGTTISPPVPAVARPSRPGRGRARLTKRS 256
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BLAST of mRNA_Ecto-sp13_S_contig8967.20505.1 vs. uniprot
Match: A0A835YYH4_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 3.110e-5
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:    1 MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHSAGGEGGAGGEGLIISPPVPAVARPSRPGRGRARLT 83
            MTYS+++ASVVAA A AG       E     EI+EA+A+ ++G  +       GA    L  +   P  ++PSRPGRGR RLT
Sbjct:  141 MTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVAD-------GANAGALSAAADAPLPSKPSRPGRGRGRLT 216
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BLAST of mRNA_Ecto-sp13_S_contig8967.20505.1 vs. uniprot
Match: A0A835YV51_9STRA (ADF-H domain-containing protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV51_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 4.300e-5
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:    1 MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHSAGGEGGAGGEGLIISPPVPAVARPSRPGRGRARLT 83
            MTYS+++ASVVAA A AG       E     EI+EA+A+ ++G  +       GA    L  +   P  ++PSRPGRGR RLT
Sbjct:  257 MTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVAD-------GANAGALSAAADAPLPSKPSRPGRGRGRLT 332
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8967.20505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2D8_9PHAE1.740e-4194.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYH4_9STRA3.110e-542.17ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835YV51_9STRA4.300e-542.17ADF-H domain-containing protein n=3 Tax=Tribonema ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8967contigEcto-sp13_S_contig8967:1895..3073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8967.20505.1mRNA_Ecto-sp13_S_contig8967.20505.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8967 1895..3073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8967.20505.1 ID=prot_Ecto-sp13_S_contig8967.20505.1|Name=mRNA_Ecto-sp13_S_contig8967.20505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHSAG
GEGGAGGEGLIISPPVPAVARPSRPGRGRARLTKRS*
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