prot_Ecto-sp13_S_contig8961.20499.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8961.20499.1
Unique Nameprot_Ecto-sp13_S_contig8961.20499.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 2.060e-50
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query:   22 DGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 110
            DGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE
Sbjct:  558 DGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 646          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.310e-49
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query:   23 GKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 110
            GKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE
Sbjct:  632 GKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 719          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: K8Z3N7_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3N7_NANGC)

HSP 1 Score: 87.0 bits (214), Expect = 9.580e-20
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    5 SHPLTPSCPLNLHCRRADGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWI-KVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 110
            +H  TPS   + H R   G +++S  H +  HRRY+P+ ADLK VLNI GV   F   C   W+ ++L+ +Q M  Q R+   HV  E REWM+AFN+ ISL  + +
Sbjct:   12 AHSSTPSLSFSSHSRGISGNLLVS--HPIFRHRRYSPVVADLKFVLNIPGVSAHFANTCMDVWLSRLLIPLQYMHAQEREADEHVTYESREWMYAFNVQISLCHVLD 116          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.500e-16
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   10 PSCPLNLHCRRADGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFTEWI-KVLLMVQKMAPQVRQQRLHVEREQREWMFAFNINISLTSLFE 110
            PS   + H R   G +++S  H +  HRRY+P+ ADLK VLNI GV   F   C   W+ ++L+ +Q +  Q R+   HV  E REWM+AFN+ ISL  + +
Sbjct:  633 PSLSFSSHSRGISGNLLVS--HPIFRHRRYSPVVADLKFVLNIPGVSAHFANTCMDVWLSRLLIPLQYIHAQEREADEHVTYESREWMYAFNVQISLCHVLD 732          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A7S3DLX1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DLX1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.270e-15
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   18 CRRADGKMVLSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRAC-----FTEWIKVLLMVQKMAPQVRQ--QRLHVEREQREWMFAFNINISLTSLFE 110
            CR       L  +H VL HRRY+P  +DLKCVLN++G+P+ F  AC       +WI  L + Q+M PQ  +   + HVE E R W+ AFN +ISL SLFE
Sbjct:    5 CRSKHLNGRLDPNHFVLTHRRYSPCISDLKCVLNVKGMPRLF--ACKGGTFLWDWIDTLSISQQMDPQHWRTWNQGHVEDESRGWVGAFNASISLGSLFE 102          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A7S3KZJ0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZJ0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.960e-14
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   27 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRAC-----FTEWIKVLLMVQKMAPQVRQQ--RLHVEREQREWMFAFNINISLTSLFE 110
            L   H VL HRRY+P  +DLKCVLN++G+P+ F   C       +WIK L + Q+M PQ  +   + HVE E R W+ AFN +ISL SLFE
Sbjct:  690 LDPMHFVLTHRRYSPCISDLKCVLNVKGMPRLF--GCKGGTFLFDWIKTLSLAQQMDPQTWRHWTQGHVEDESRGWVGAFNASISLGSLFE 778          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: B7GBX5_PHATC (E3 ubiquitin-protein ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBX5_PHATC)

HSP 1 Score: 76.3 bits (186), Expect = 7.060e-14
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   27 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFT---EWIKVLLMVQKMAPQVRQQRL--HVEREQREWMFAFNINISLTSLFE 110
            L+ +H VL HRRY+P  +DLKCVLN++G+P+ F     T   +WI+VL + Q M PQ  +     HVE E R W+ AFN +ISL S+FE
Sbjct:  637 LNPNHHVLAHRRYSPCISDLKCVLNVKGMPRLFAAKGGTFLGDWIEVLSIAQFMDPQSWRHWTFGHVEDESRGWVGAFNASISLGSIFE 725          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A1Z5JBN3_FISSO (E3 ubiquitin-protein ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBN3_FISSO)

HSP 1 Score: 72.0 bits (175), Expect = 2.250e-12
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   27 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRACFT---EWIKVLLMVQKMAPQVRQQ--RLHVEREQREWMFAFNINISLTSLFE 110
            L  +H VL HRRY+P  +DLKCVLN+ G+P+    A  T   +W+  L + Q M PQ  +   + HVE E R W+ AFN +ISL SLFE
Sbjct:  577 LDPNHFVLAHRRYSPCVSDLKCVLNVAGMPRVACCAKTTFLKDWVATLAIAQFMDPQSWRNWNQGHVEDESRGWVGAFNASISLGSLFE 665          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A1E7FD43_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD43_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.430e-12
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   27 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLR--ACFT-EWIKVLLMVQKMAPQVRQQ--RLHVEREQREWMFAFNINISLTSLFE 110
            L+ +H V+ +RRY+P  +DLKCVLN++G+P+ F     CF  +WI  L + Q M  QV +   + HVE E R W+ AFN +ISL SLFE
Sbjct:  540 LNPNHFVMMNRRYSPCISDLKCVLNVKGMPRLFASKSGCFLKDWIAALGLGQMMDSQVWRDWTQGHVEVEHRGWVGAFNASISLGSLFE 628          
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Match: A0A448Z6T2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6T2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.710e-11
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   27 LSASHSVLEHRRYNPIAADLKCVLNIEGVPQRFLRAC---FTEWIKVLLMVQKMAPQVRQ--QRLHVEREQREWMFAFNINISLTSLFE 110
            L  +H V+ +RRY+P  +DLKCVLN++G+P+ F         +WI  L + Q M  QV +   + HVE E R W+ AFN +ISL SLFE
Sbjct:  761 LDPNHFVMMNRRYSPCISDLKCVLNVKGMPRLFASKSSLFLNDWIAALGLGQMMDSQVWRCWSQGHVEVEHRGWVGAFNASISLGSLFE 849          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8961.20499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G2M8_ECTSI2.060e-50100.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JTE4_9PHAE1.310e-49100.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
K8Z3N7_NANGC9.580e-2042.06Uncharacterized protein (Fragment) n=2 Tax=Nannoch... [more]
W7U0V5_9STRA9.500e-1641.18E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]
A0A7S3DLX1_9STRA7.270e-1546.00E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
A0A7S3KZJ0_9STRA3.960e-1448.35E3 ubiquitin-protein ligase n=1 Tax=Amphora coffei... [more]
B7GBX5_PHATC7.060e-1448.31E3 ubiquitin-protein ligase n=1 Tax=Phaeodactylum ... [more]
A0A1Z5JBN3_FISSO2.250e-1247.19E3 ubiquitin-protein ligase n=2 Tax=Fistulifera so... [more]
A0A1E7FD43_9STRA5.430e-1247.19E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Fra... [more]
A0A448Z6T2_9STRA3.710e-1144.94E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzsch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8961contigEcto-sp13_S_contig8961:644..1564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8961.20499.1mRNA_Ecto-sp13_S_contig8961.20499.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8961 644..1564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8961.20499.1 ID=prot_Ecto-sp13_S_contig8961.20499.1|Name=mRNA_Ecto-sp13_S_contig8961.20499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MPIPSHPLTPSCPLNLHCRRADGKMVLSASHSVLEHRRYNPIAADLKCVL
NIEGVPQRFLRACFTEWIKVLLMVQKMAPQVRQQRLHVEREQREWMFAFN
INISLTSLFE*
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